RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 HAUS1Q96CS2 278 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 ORC3Q9UBD5 711 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TTC41PQ6P2S7 1318 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TRIM75PA6NK02 468 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 E7EVH7 732 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 ZSCAN23Q3MJ62 389 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 IQUBQ8NA54 791 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 NDUFAB1O14561 156 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 GSDMBQ8TAX9 411 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 PNMA2Q9UL42 364 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 USP16Q9Y5T5 823 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 CFTRP13569 1480 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 ELP1O95163 1332 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 ARHGAP4P98171 946 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 RBBP5Q15291 538 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 CYP26C1Q6V0L0 522 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TRMT1Q9NXH9 659 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 VPS18Q9P253 973 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 HSPA1LP34931 641 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 CNNM4Q6P4Q7 775 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TOPBP1Q92547 1522 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 TROVE2P10155 538 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 EPB41P11171 864 aaKnown RBP8.26□□□□□ -1.09
PTPN3-203ENST00000412145 GEN1Q17RS7 908 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 MCTP2Q6DN12 878 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
PTPN3-203ENST00000412145 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 HAUS3Q68CZ6 603 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 BBOF1Q8ND07 529 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 GRK7Q8WTQ7 553 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC68Q9H2F9 335 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 SLMAPQ14BN4 828 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 NAA16Q6N069 864 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 ZBTB43O43298 467 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 INPP1P49441 399 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 APOBRQ0VD83 1088 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 C8orf74Q6P047 294 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 HOOK2Q96ED9 719 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC51Q96ER9 411 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 TSPY2A6NKD2 308 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 ZNF354CQ86Y25 554 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CKAP2LQ8IYA6 745 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 EIF2AK4Q9P2K8 1649 aaKnown RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 DNA2P51530 1060 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 ASIC1P78348 528 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC65Q8IXS2 484 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CPLX3Q8WVH0 158 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 TUBB6Q9BUF5 446 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 RIOK3O14730 519 aaKnown RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 MAN1A1P33908 653 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 NONOQ15233 471 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 BRDTQ58F21 947 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 MCM10Q7L590 875 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 C1orf115Q9H7X2 142 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 KCNK9Q9NPC2 374 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CALUO43852 315 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-203ENST00000412145 KDM4AO75164 1064 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 PDE6BP35913 854 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 DBN1Q16643 649 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 RTN1Q16799 776 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD20A3Q5VUR7 823 aa8.25□□□□□ -1.09
PTPN3-203ENST00000412145 CCT6AP40227 531 aaKnown RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 HDAC1Q13547 482 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC84Q86UT8 332 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 MMRN2Q9H8L6 949 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 BAG5Q9UL15 447 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 GNA14O95837 355 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 MYL6BP14649 208 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 MAP2K2P36507 400 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 AP1ARQ63HQ0 302 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 NRBF2Q96F24 287 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 DDX27Q96GQ7 796 aaKnown RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 MED4Q9NPJ6 270 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 AKR1B15C9JRZ8 316 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 FOXO3O43524 673 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 HIP1RO75146 1068 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 FLOT1O75955 427 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 WAPLQ7Z5K2 1190 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 FERMT3Q86UX7 667 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 CCDC170Q8IYT3 715 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ZNF277Q9NRM2 450 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 EPS15L1Q9UBC2 864 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ORC6Q9Y5N6 252 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 PSDA5PKW4 1024 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ASPHQ12797 758 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD20A4Q4UJ75 823 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD20A8PQ5CZ79 823 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD20A2Q5SQ80 823 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 ANKRD20A1Q5TYW2 823 aa8.24□□□□□ -1.09
PTPN3-203ENST00000412145 PDZD4Q76G19 769 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-203ENST00000412145 RRP36Q96EU6 259 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms