RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GATA6Q92908 595 aa5.4□□□□□ -1.54
HMGB3P2-201ENST00000411913 A6NHS1 94 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 ESRRAP11474 423 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 ADH5P11766 374 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 EDN3P14138 238 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 ZNF574Q6ZN55 896 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 BCL7CQ8WUZ0 217 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 SLC38A3Q99624 504 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 GGNBP2Q9H3C7 697 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
HMGB3P2-201ENST00000411913 PRKCSHP14314 528 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 TMEM132AQ24JP5 1023 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 AKAP4Q5JQC9 854 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 SPOCD1Q6ZMY3 1216 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 CHRDQ9H2X0 955 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 RAD18Q9NS91 495 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 ZNF777Q9ULD5 760 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
HMGB3P2-201ENST00000411913 EREGO14944 169 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 PHACTR2O75167 634 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 HP1BP3Q5SSJ5 553 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 SPRED2Q7Z698 418 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 ATG4DQ86TL0 474 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 FAM168AQ92567 244 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 SEMA6CQ9H3T2 930 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 SEPT3Q9UH03 358 aa5.37□□□□□ -1.55
HMGB3P2-201ENST00000411913 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 PDGFAP04085 211 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 CYP11A1P05108 521 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 MAOBP27338 520 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 ASPAP45381 313 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 BNIP3Q12983 259 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 CYP27C1Q4G0S4 372 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 NOM1Q5C9Z4 860 aaKnown RBP5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 OGFOD3Q6PK18 319 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 MISP3Q96FF7 219 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 BHLHE41Q9C0J9 482 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 LGR6Q9HBX8 967 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 AP4E1Q9UPM8 1137 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
HMGB3P2-201ENST00000411913 MZF1P28698 734 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 POU4F3Q15319 338 aa5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 TMEM164Q5U3C3 297 aa5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 TMEM40Q8WWA1 233 aa5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 ZFYVE1Q9HBF4 777 aa5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 FAM105AQ9NUU6 356 aa5.35□□□□□ -1.55
HMGB3P2-201ENST00000411913 FUT4P22083 530 aa5.34□□□□□ -1.55
HMGB3P2-201ENST00000411913 AAMPQ13685 434 aa5.34□□□□□ -1.55
HMGB3P2-201ENST00000411913 PI4K2BQ8TCG2 481 aa5.34□□□□□ -1.55
HMGB3P2-201ENST00000411913 CLP1Q92989 425 aaKnown RBP5.34□□□□□ -1.55
HMGB3P2-201ENST00000411913 ACSS3Q9H6R3 686 aa5.34□□□□□ -1.55
HMGB3P2-201ENST00000411913 METTL12A8MUP2 240 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 DYNC1LI2O43237 492 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 TNFRSF21O75509 655 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 GLIS3Q8NEA6 775 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 SNX29Q8TEQ0 813 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 LATS2Q9NRM7 1088 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 C1GALT1Q9NS00 363 aa5.33□□□□□ -1.56
HMGB3P2-201ENST00000411913 ATG7O95352 703 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 RNASE1P07998 156 aaKnown RBP5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 CD8BP10966 210 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 EIF1AXP47813 144 aaKnown RBP5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 SEZ6L2Q6UXD5 910 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 WFDC3Q8IUB2 231 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 DDX54Q8TDD1 881 aaKnown RBP5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 NETO1Q8TDF5 533 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 HELQQ8TDG4 1101 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 FAM84AQ96KN4 292 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 CORO1BQ9BR76 489 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 CLEC4MQ9H2X3 399 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 MBNL3Q9NUK0 354 aaKnown RBP5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 POLIQ9UNA4 740 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 AMOTL2Q9Y2J4 779 aa5.32□□□□□ -1.56
HMGB3P2-201ENST00000411913 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 A0A096LPE4 126 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 A0A1W2PPZ6 126 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 CTSBP07858 339 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 ZNF423Q2M1K9 1284 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 ALKBH2Q6NS38 261 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 ARHGAP27Q6ZUM4 889 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 PLD6Q8N2A8 252 aaKnown RBP5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 FAM181AQ8N9Y4 354 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 FOXD3Q9UJU5 478 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 VAV3Q9UKW4 847 aa5.31□□□□□ -1.56
HMGB3P2-201ENST00000411913 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 FAM87AP0C7U9 286 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 MPSTP25325 297 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 EHHADHQ08426 723 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 PDE3AQ14432 1141 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 LRRN4CLQ8ND94 238 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 ADAMTS6Q9UKP5 1117 aa5.3□□□□□ -1.56
HMGB3P2-201ENST00000411913 POLR3DP05423 398 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms