RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MAP3K11Q16584 847 aa27.85■■■□□ 2.05
MSH6-202ENST00000411819 SPRYD7Q5W111 196 aa27.85■■■□□ 2.05
MSH6-202ENST00000411819 LPIN2Q92539 896 aa27.85■■■□□ 2.05
MSH6-202ENST00000411819 SLC10A4Q96EP9 437 aa27.85■■■□□ 2.05
MSH6-202ENST00000411819 TBC1D8O95759 1140 aa27.84■■■□□ 2.05
MSH6-202ENST00000411819 ATG9AQ7Z3C6 839 aa27.84■■■□□ 2.05
MSH6-202ENST00000411819 CLMNQ96JQ2 1002 aa27.84■■■□□ 2.05
MSH6-202ENST00000411819 MEIS3Q99687 375 aa27.84■■■□□ 2.05
MSH6-202ENST00000411819 OTOFQ9HC10 1997 aa27.84■■■□□ 2.05
MSH6-202ENST00000411819 TCP10L2B9ZVM9 353 aa27.83■■■□□ 2.05
MSH6-202ENST00000411819 IREB2P48200 963 aaKnown RBP27.83■■■□□ 2.05
MSH6-202ENST00000411819 TM4SF4P48230 202 aa27.83■■■□□ 2.05
MSH6-202ENST00000411819 TEKT1Q969V4 418 aa27.83■■■□□ 2.05
MSH6-202ENST00000411819 TNNI2P48788 182 aa27.82■■■□□ 2.04
MSH6-202ENST00000411819 CIAO1O76071 339 aa27.81■■■□□ 2.04
MSH6-202ENST00000411819 ATP2B3Q16720 1220 aa27.81■■■□□ 2.04
MSH6-202ENST00000411819 CEP126Q9P2H0 1117 aa27.81■■■□□ 2.04
MSH6-202ENST00000411819 FBXO3Q9UK99 471 aa27.81■■■□□ 2.04
MSH6-202ENST00000411819 PA2G4Q9UQ80 394 aaKnown RBP27.81■■■□□ 2.04
MSH6-202ENST00000411819 MAST3O60307 1309 aa27.81■■■□□ 2.04
MSH6-202ENST00000411819 HDLBPQ00341 1268 aaKnown RBP27.8■■■□□ 2.04
MSH6-202ENST00000411819 ARHGAP45Q92619 1136 aa27.8■■■□□ 2.04
MSH6-202ENST00000411819 ZBTB48P10074 688 aaPredicted RBP27.79■■■□□ 2.04
MSH6-202ENST00000411819 CDAN1Q8IWY9 1227 aa27.79■■■□□ 2.04
MSH6-202ENST00000411819 WNK4Q96J92 1243 aa27.79■■■□□ 2.04
MSH6-202ENST00000411819 TMEM39BQ9GZU3 492 aa27.79■■■□□ 2.04
MSH6-202ENST00000411819 MANSC4A6NHS7 340 aaPredicted RBP27.78■■■□□ 2.04
MSH6-202ENST00000411819 USP2O75604 605 aaPredicted RBP27.78■■■□□ 2.04
MSH6-202ENST00000411819 CACNB3P54284 484 aa27.78■■■□□ 2.04
MSH6-202ENST00000411819 CTU1Q7Z7A3 348 aaKnown RBP27.78■■■□□ 2.04
MSH6-202ENST00000411819 ANKRD13AQ8IZ07 590 aa27.78■■■□□ 2.04
MSH6-202ENST00000411819 FRAT1Q92837 279 aaPredicted RBP27.78■■■□□ 2.04
MSH6-202ENST00000411819 TMOD2Q9NZR1 351 aa27.78■■■□□ 2.04
MSH6-202ENST00000411819 SUGT1Q9Y2Z0 365 aa27.78■■■□□ 2.04
MSH6-202ENST00000411819 LAMB1P07942 1786 aa27.78■■■□□ 2.04
MSH6-202ENST00000411819 UNCXA6NJT0 531 aa27.77■■■□□ 2.04
MSH6-202ENST00000411819 GNAI3P08754 354 aa27.77■■■□□ 2.04
MSH6-202ENST00000411819 IL15P40933 162 aaPredicted RBP27.77■■■□□ 2.04
MSH6-202ENST00000411819 INTS3Q68E01 1043 aaKnown RBP27.77■■■□□ 2.04
MSH6-202ENST00000411819 WDR66Q8TBY9 1149 aa27.77■■■□□ 2.04
MSH6-202ENST00000411819 ZNF296Q8WUU4 475 aaPredicted RBP27.77■■■□□ 2.04
MSH6-202ENST00000411819 IPO8O15397 1037 aaKnown RBP27.76■■■□□ 2.03
MSH6-202ENST00000411819 ZDHHC15Q96MV8 337 aa27.76■■■□□ 2.03
MSH6-202ENST00000411819 TEPSINQ96N21 525 aa27.76■■■□□ 2.03
MSH6-202ENST00000411819 GNL3LQ9NVN8 582 aaKnown RBP27.75■■■□□ 2.03
MSH6-202ENST00000411819 GPR25O00155 361 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 BCAR3O75815 825 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 ALDH1A1P00352 501 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 TRIM27P14373 513 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 HNRNPUQ00839 825 aaKnown RBP eCLIP27.74■■■□□ 2.031e-6■□□□□ 11
MSH6-202ENST00000411819 ELP3Q9H9T3 547 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 COPRSQ9NQ92 184 aa27.74■■■□□ 2.03
MSH6-202ENST00000411819 SRGAP3O43295 1099 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 INHBEP58166 350 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 ATF7IPQ6VMQ6 1270 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 IFNL1Q8IU54 200 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 MRIQ9BWK5 157 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 TNNQ9UQP3 1299 aa27.73■■■□□ 2.03
MSH6-202ENST00000411819 APOBEC3HQ6NTF7 200 aaKnown RBP27.72■■■□□ 2.03
MSH6-202ENST00000411819 HHIPL2Q6UWX4 724 aa27.72■■■□□ 2.03
MSH6-202ENST00000411819 MIER1Q8N108 512 aa27.72■■■□□ 2.03
MSH6-202ENST00000411819 CLUAP1Q96AJ1 413 aa27.72■■■□□ 2.03
MSH6-202ENST00000411819 GJA5P36382 358 aa27.71■■■□□ 2.03
MSH6-202ENST00000411819 PHKA1P46020 1223 aa27.71■■■□□ 2.03
MSH6-202ENST00000411819 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
MSH6-202ENST00000411819 OPTNQ96CV9 577 aa27.71■■■□□ 2.03
MSH6-202ENST00000411819 CFHR5Q9BXR6 569 aa27.71■■■□□ 2.03
MSH6-202ENST00000411819 IGF2BP3O00425 579 aaKnown RBP eCLIP27.7■■■□□ 2.02
MSH6-202ENST00000411819 PRDX5P30044 214 aa27.7■■■□□ 2.02
MSH6-202ENST00000411819 NOM1Q5C9Z4 860 aaKnown RBP27.7■■■□□ 2.02
MSH6-202ENST00000411819 R3HDMLQ9H3Y0 253 aa27.7■■■□□ 2.02
MSH6-202ENST00000411819 DENND2AQ9ULE3 1009 aa27.7■■■□□ 2.02
MSH6-202ENST00000411819 FKTNO75072 461 aa27.69■■■□□ 2.02
MSH6-202ENST00000411819 LDHBP07195 334 aaKnown RBP27.69■■■□□ 2.02
MSH6-202ENST00000411819 ADORA1P30542 326 aa27.69■■■□□ 2.02
MSH6-202ENST00000411819 DIXDC1Q155Q3 683 aa27.69■■■□□ 2.02
MSH6-202ENST00000411819 CSADQ9Y600 493 aa27.69■■■□□ 2.02
MSH6-202ENST00000411819 SEMA3EO15041 775 aa27.68■■■□□ 2.02
MSH6-202ENST00000411819 MLLT1Q03111 559 aaPredicted RBP27.68■■■□□ 2.02
MSH6-202ENST00000411819 VGLL4Q14135 290 aa27.68■■■□□ 2.02
MSH6-202ENST00000411819 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.68■■■□□ 2.02
MSH6-202ENST00000411819 FAM83AQ86UY5 434 aa27.68■■■□□ 2.02
MSH6-202ENST00000411819 DAGLAQ9Y4D2 1042 aa27.68■■■□□ 2.02
MSH6-202ENST00000411819 GNAI2P04899 355 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 MAP3K9P80192 1104 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 MTX1Q13505 466 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 FKBP1CQ5VVH2 108 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 CCDC102BQ68D86 513 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 OTUD7BQ6GQQ9 843 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.67■■■□□ 2.02
MSH6-202ENST00000411819 AK9Q5TCS8 1911 aa27.67■■■□□ 2.02
MSH6-202ENST00000411819 RPAP1Q9BWH6 1393 aaPredicted RBP27.66■■■□□ 2.02
MSH6-202ENST00000411819 TFCP2Q12800 502 aa27.66■■■□□ 2.02
MSH6-202ENST00000411819 PKN2Q16513 984 aaKnown RBP27.66■■■□□ 2.02
MSH6-202ENST00000411819 CNKSR2Q8WXI2 1034 aa27.66■■■□□ 2.02
MSH6-202ENST00000411819 HOOK2Q96ED9 719 aa27.66■■■□□ 2.02
MSH6-202ENST00000411819 SALL1Q9NSC2 1324 aa27.66■■■□□ 2.02
MSH6-202ENST00000411819 TIMM10P62072 90 aa27.65■■■□□ 2.02
MSH6-202ENST00000411819 ZKSCAN2Q63HK3 967 aa27.65■■■□□ 2.02
MSH6-202ENST00000411819 WRNIP1Q96S55 665 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms