RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
LINC00396-201ENST00000411690 GDF9O60383 454 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 S1PR4O95977 384 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 PRKG1Q13976 671 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 GIGYF2Q6Y7W6 1299 aaKnown RBP8.47□□□□□ -1.05
LINC00396-201ENST00000411690 AGBL3Q8NEM8 1001 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 MYOZ2Q9NPC6 264 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 DUOX1Q9NRD9 1551 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 IGF2BP3O00425 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00396-201ENST00000411690 USP17L8P0C7I0 530 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
LINC00396-201ENST00000411690 MYL6BP14649 208 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 OTUD7BQ6GQQ9 843 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 RTF1Q92541 710 aaKnown RBP8.46□□□□□ -1.06
LINC00396-201ENST00000411690 ZC3H12CQ9C0D7 883 aaKnown RBP8.46□□□□□ -1.06
LINC00396-201ENST00000411690 AAASQ9NRG9 546 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
LINC00396-201ENST00000411690 POLLQ9UGP5 575 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 NR2E3Q9Y5X4 410 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.06
LINC00396-201ENST00000411690 CAP1Q01518 475 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 CRHR2Q13324 411 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 LDLRAD1Q5T700 205 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
LINC00396-201ENST00000411690 MCM10Q7L590 875 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 DEFB123Q8N688 67 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 SLC10A4Q96EP9 437 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 HTATIP2Q9BUP3 242 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 ANGEL1Q9UNK9 670 aaKnown RBP8.45□□□□□ -1.06
LINC00396-201ENST00000411690 STXBP5LQ9Y2K9 1186 aa8.45□□□□□ -1.06
LINC00396-201ENST00000411690 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
LINC00396-201ENST00000411690 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
LINC00396-201ENST00000411690 GPSM2P81274 684 aa8.44□□□□□ -1.06
LINC00396-201ENST00000411690 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
LINC00396-201ENST00000411690 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
LINC00396-201ENST00000411690 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
LINC00396-201ENST00000411690 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
LINC00396-201ENST00000411690 ANKRD36CQ5JPF3 1778 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
LINC00396-201ENST00000411690 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
LINC00396-201ENST00000411690 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00396-201ENST00000411690 TBC1D16Q8TBP0 767 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 SH3TC2Q8TF17 1288 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 MIS18AQ9NYP9 233 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 TRMT112Q9UI30 125 aaKnown RBP8.43□□□□□ -1.06
LINC00396-201ENST00000411690 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
LINC00396-201ENST00000411690 WNT10BO00744 389 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 DCTN1Q14203 1278 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 Q7L0L9 218 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 CELF1Q92879 486 aaKnown RBP8.42□□□□□ -1.06
LINC00396-201ENST00000411690 SHISA4Q96DD7 197 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 GMLQ99445 158 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 PRR14Q9BWN1 585 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 DACH1Q9UI36 760 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 FZD1Q9UP38 647 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 LRRC37AA6NMS7 1700 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 LAMB2P55268 1798 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 TAF1P21675 1872 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 CEP290O15078 2479 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 HTTP42858 3142 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 COL6A3P12111 3177 aa8.42□□□□□ -1.06
LINC00396-201ENST00000411690 SCN9AQ15858 1988 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 LAMB4A4D0S4 1761 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 SH3TC1Q8TE82 1336 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 PRKAR2BP31323 418 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 E2F4Q16254 413 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
LINC00396-201ENST00000411690 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 OGFOD1Q8N543 542 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 PTPN18Q99952 460 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 STAP2Q9UGK3 403 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
LINC00396-201ENST00000411690 A0A0C4DFX4 3053 aa8.41□□□□□ -1.06
LINC00396-201ENST00000411690 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
LINC00396-201ENST00000411690 UFL1O94874 794 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 MTFR1Q15390 333 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 HSP90AB3PQ58FF7 597 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 ZFYVE28Q9HCC9 887 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 MTMR10Q9NXD2 777 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 ANKIB1Q9P2G1 1089 aa8.4□□□□□ -1.06
LINC00396-201ENST00000411690 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
LINC00396-201ENST00000411690 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
LINC00396-201ENST00000411690 GJA8P48165 433 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
LINC00396-201ENST00000411690 KIF22Q14807 665 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 UBE2Q1Q7Z7E8 422 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 APOBEC3FQ8IUX4 373 aaKnown RBP8.39□□□□□ -1.07
LINC00396-201ENST00000411690 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
LINC00396-201ENST00000411690 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms