RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 GMLQ99445 158 aa11.53□□□□□ -0.56
RN7SKP3-201ENST00000411409 COL4A5P29400 1685 aa11.52□□□□□ -0.56
RN7SKP3-201ENST00000411409 H7C1D1 291 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 RAD17O75943 681 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 GSTO1P78417 241 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 RASGRF1Q13972 1273 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 MFSD14BQ5SR56 506 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 MTMR14Q8NCE2 650 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 HAUS7Q99871 368 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 HMG20BQ9P0W2 317 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 WDR90Q96KV7 1748 aa11.52□□□□□ -0.57
RN7SKP3-201ENST00000411409 LDHCP07864 332 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 MCAMP43121 646 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 FAM163AQ96GL9 167 aaPredicted RBP11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 HACL1Q9UJ83 578 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZNF541Q9H0D2 1346 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 SCN4AP35499 1836 aa11.51□□□□□ -0.57
RN7SKP3-201ENST00000411409 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 LDHBP07195 334 aaKnown RBP11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 PDE1AP54750 535 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 HTRA3P83110 453 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 HHIPL2Q6UWX4 724 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 LNPKQ9C0E8 428 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 GJA3Q9Y6H8 435 aa11.5□□□□□ -0.57
RN7SKP3-201ENST00000411409 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 GMPSP49915 693 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 SCNN1DP51172 638 aa11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 RASEFQ8IZ41 740 aa11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
RN7SKP3-201ENST00000411409 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 MYO1BO43795 1136 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 CHAF1AQ13111 956 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 TEKT1Q969V4 418 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 EVI5LQ96CN4 794 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZDHHC15Q96MV8 337 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 KCNQ5Q9NR82 932 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
RN7SKP3-201ENST00000411409 MYH13Q9UKX3 1938 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 PITPNM2Q9BZ72 1349 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 PLCG2P16885 1265 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZAP70P43403 619 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 CERS5Q8N5B7 392 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 BOLA2Q9H3K6 86 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 TAF1DQ9H5J8 278 aaPredicted RBP11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 MYOZ2Q9NPC6 264 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 ABCF2Q9UG63 623 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
RN7SKP3-201ENST00000411409 COL1A1P02452 1464 aaPredicted RBP11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 GAKO14976 1311 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 HIP1O00291 1037 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 BAG3O95817 575 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 EPHX2P34913 555 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 SCARF1Q14162 830 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 DLGAP5Q15398 846 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 FKBP1CQ5VVH2 108 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 KIAA0825Q8IV33 1275 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 NSUN4Q96CB9 384 aaKnown RBP11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZBED3Q96IU2 234 aaPredicted RBP11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
RN7SKP3-201ENST00000411409 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP3-201ENST00000411409 POTECB2RU33 542 aa11.45□□□□□ -0.58
RN7SKP3-201ENST00000411409 CRKP46108 304 aa11.45□□□□□ -0.58
RN7SKP3-201ENST00000411409 PPP4CP60510 307 aa11.45□□□□□ -0.58
RN7SKP3-201ENST00000411409 NAA16Q6N069 864 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms