RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 A0A096LPE4 126 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 A0A1W2PPZ6 126 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 FOSL1P15407 271 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 MAOBP27338 520 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 ARL4DP49703 201 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 USP11P51784 963 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZNF574Q6ZN55 896 aaPredicted RBP3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 SPRED2Q7Z698 418 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 WDR89Q96FK6 387 aaPredicted RBP3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 OSBPL1AQ9BXW6 950 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 ATG3Q9NT62 314 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 FAM105AQ9NUU6 356 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZC3H7BQ9UGR2 993 aaKnown RBP3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 LEMD3Q9Y2U8 911 aa3.42□□□□□ -1.86
RNU2-55P-201ENST00000411146 FAM177BA6PVY3 158 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ABL1P00519 1130 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ADH5P11766 374 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 RAB6AP20340 208 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZNF157P51786 506 aaPredicted RBP3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 PCDH1Q08174 1060 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 BNIP3Q12983 259 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ORC1Q13415 861 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 AKAP4Q5JQC9 854 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 SEZ6L2Q6UXD5 910 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CBLL1Q75N03 491 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZNF765Q7L2R6 523 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZAR1Q86SH2 424 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CCNJLQ8IV13 435 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 GJD3Q8N144 294 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CCDC82Q8N4S0 544 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 EZH1Q92800 747 aaPredicted RBP3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 PMEPA1Q969W9 287 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CCDC97Q96F63 343 aaPredicted RBP3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 TBC1D32Q96NH3 1257 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 LRRC4CQ9HCJ2 640 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CYP4F12Q9HCS2 524 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 PAK6Q9NQU5 681 aaPredicted RBP3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 C1GALT1Q9NS00 363 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 PPP1R9AQ9ULJ8 1098 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 HIF3AQ9Y2N7 669 aa3.41□□□□□ -1.86
RNU2-55P-201ENST00000411146 CYP26A1O43174 497 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 PRNPP04156 253 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 EDN3P14138 238 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 PCSK2P16519 638 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 CD96P40200 585 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 JAG1P78504 1218 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 FKBP4Q02790 459 aaKnown RBP eCLIP3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 OGFOD2Q6N063 350 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 DYMQ7RTS9 669 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 SNX29Q8TEQ0 813 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZC3H12CQ9C0D7 883 aaKnown RBP3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 SEMA6CQ9H3T2 930 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 SERPINA10Q9UK55 444 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 AMOTL2Q9Y2J4 779 aa3.4□□□□□ -1.87
RNU2-55P-201ENST00000411146 RPLP1P05386 114 aaKnown RBP3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 LIG1P18858 919 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 SERPINB4P48594 390 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 FAAP100Q0VG06 881 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 POU4F3Q15319 338 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 PAOXQ6QHF9 649 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 TP53INP2Q8IXH6 220 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 GALNT12Q8IXK2 581 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 TTC16Q8NEE8 873 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 CLEC4MQ9H2X3 399 aaPredicted RBP3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 SOX17Q9H6I2 414 aaPredicted RBP3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 ACSS3Q9H6R3 686 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 LIN7BQ9HAP6 207 aa3.39□□□□□ -1.87
RNU2-55P-201ENST00000411146 CARMIL2Q6F5E8 1435 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 FAM13AO94988 1023 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 IGHA2P01877 340 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 ITGB5P18084 799 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 ASPAP45381 313 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 ARHGAP4P98171 946 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 ALKBH2Q6NS38 261 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 MPRIPQ6WCQ1 1025 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 FAM181AQ8N9Y4 354 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 STK35Q8TDR2 534 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 WDR18Q9BV38 432 aa3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 GSX1Q9H4S2 264 aaPredicted RBP3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 CCDC86Q9H6F5 360 aaKnown RBP3.38□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZNF862O60290 1169 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 ICMTO60725 284 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 AOC2O75106 756 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 LEFTY1O75610 366 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 PAPLNO95428 1278 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 C8AP07357 584 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 CDK5R2Q13319 367 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 PI16Q6UXB8 463 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 PLD6Q8N2A8 252 aaKnown RBP3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 POU5F2Q8N7G0 328 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 FLCNQ8NFG4 579 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 BCL7CQ8WUZ0 217 aaPredicted RBP3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZNF576Q9H609 170 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 NPHS2Q9NP85 383 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 RAD18Q9NS91 495 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 ADAMTS6Q9UKP5 1117 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 AP4E1Q9UPM8 1137 aa3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 DAGLAQ9Y4D2 1042 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms