RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 GPT2Q8TD30 523 aa20.18■□□□□ 0.82
GCFC2-202ENST00000409857 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 UTRNP46939 3433 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 HSP90AA2PQ14568 343 aaPredicted RBP20.17■□□□□ 0.82
GCFC2-202ENST00000409857 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
GCFC2-202ENST00000409857 GPATCH3Q96I76 525 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 TTC39AQ5SRH9 613 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 DENND2AQ9ULE3 1009 aa20.17■□□□□ 0.82
GCFC2-202ENST00000409857 ZSCAN30Q86W11 494 aa20.16■□□□□ 0.82
GCFC2-202ENST00000409857 CWC22Q9HCG8 908 aaKnown RBP20.16■□□□□ 0.82
GCFC2-202ENST00000409857 ECHDC1Q9NTX5 307 aa20.16■□□□□ 0.82
GCFC2-202ENST00000409857 ERC2O15083 957 aa20.16■□□□□ 0.82
GCFC2-202ENST00000409857 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
GCFC2-202ENST00000409857 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
GCFC2-202ENST00000409857 REC8O95072 547 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 ATP5JP18859 108 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 STRIP1Q5VSL9 837 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 COL1A1P02452 1464 aaPredicted RBP20.15■□□□□ 0.82
GCFC2-202ENST00000409857 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 MX1P20591 662 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
GCFC2-202ENST00000409857 TNIP1Q15025 636 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
GCFC2-202ENST00000409857 PDE1AP54750 535 aa20.14■□□□□ 0.82
GCFC2-202ENST00000409857 RASGRF1Q13972 1273 aa20.14■□□□□ 0.82
GCFC2-202ENST00000409857 AOX1Q06278 1338 aa20.14■□□□□ 0.81
GCFC2-202ENST00000409857 CXCL9Q07325 125 aa20.14■□□□□ 0.81
GCFC2-202ENST00000409857 CIAPIN1Q6FI81 312 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 OSBPL3Q9H4L5 887 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 SALL1Q9NSC2 1324 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
GCFC2-202ENST00000409857 MCAMP43121 646 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 NEK4P51957 841 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 SPATA5Q8NB90 893 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 TBC1D22AQ8WUA7 517 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 HMG20BQ9P0W2 317 aa20.13■□□□□ 0.81
GCFC2-202ENST00000409857 DACT2Q5SW24 774 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 WDR66Q8TBY9 1149 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
GCFC2-202ENST00000409857 DOCK2Q92608 1830 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 GTF2IP78347 998 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 KIAA1211Q6ZU35 1233 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
GCFC2-202ENST00000409857 SCARF1Q14162 830 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 GPC2Q8N158 579 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 TMEM63CQ9P1W3 806 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 PSMD14O00487 310 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 RRP9O43818 475 aaKnown RBP20.11■□□□□ 0.81
GCFC2-202ENST00000409857 RAD17O75943 681 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
GCFC2-202ENST00000409857 PI4K2BQ8TCG2 481 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 TMX3Q96JJ7 454 aa20.11■□□□□ 0.81
GCFC2-202ENST00000409857 IGSF3O75054 1194 aa20.1■□□□□ 0.81
GCFC2-202ENST00000409857 GLRX3O76003 335 aaKnown RBP20.1■□□□□ 0.81
GCFC2-202ENST00000409857 MSNP26038 577 aaKnown RBP20.1■□□□□ 0.81
GCFC2-202ENST00000409857 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
GCFC2-202ENST00000409857 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
GCFC2-202ENST00000409857 HAUS7Q99871 368 aa20.1■□□□□ 0.81
GCFC2-202ENST00000409857 PALD1Q9ULE6 856 aa20.1■□□□□ 0.81
GCFC2-202ENST00000409857 SUGT1Q9Y2Z0 365 aa20.1■□□□□ 0.81
GCFC2-202ENST00000409857 SYCE3A1L190 88 aa20.09■□□□□ 0.81
GCFC2-202ENST00000409857 RPS12P25398 132 aaKnown RBP20.09■□□□□ 0.81
GCFC2-202ENST00000409857 AGBL3Q8NEM8 1001 aa20.09■□□□□ 0.81
GCFC2-202ENST00000409857 WDR90Q96KV7 1748 aa20.09■□□□□ 0.81
GCFC2-202ENST00000409857 MAST2Q6P0Q8 1798 aa20.09■□□□□ 0.81
GCFC2-202ENST00000409857 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.81
GCFC2-202ENST00000409857 MMP14P50281 582 aa20.08■□□□□ 0.81
GCFC2-202ENST00000409857 CHAF1AQ13111 956 aaPredicted RBP20.08■□□□□ 0.81
GCFC2-202ENST00000409857 GLTPD2A6NH11 291 aa20.08■□□□□ 0.8
GCFC2-202ENST00000409857 GLIPR1L2Q4G1C9 344 aa20.08■□□□□ 0.8
GCFC2-202ENST00000409857 MFSD14BQ5SR56 506 aa20.08■□□□□ 0.8
GCFC2-202ENST00000409857 SCN4AP35499 1836 aa20.08■□□□□ 0.8
GCFC2-202ENST00000409857 MYH7P12883 1935 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 PI16Q6UXB8 463 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 FBXW7Q969H0 707 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 GMLQ99445 158 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 BOLA2Q9H3K6 86 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 ZAP70P43403 619 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 TTF1Q15361 905 aaPredicted RBP20.07■□□□□ 0.8
GCFC2-202ENST00000409857 DPF2Q92785 391 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 ESYT1Q9BSJ8 1104 aa20.07■□□□□ 0.8
GCFC2-202ENST00000409857 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.07■□□□□ 0.8
GCFC2-202ENST00000409857 OFD1O75665 1012 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 CERS5Q8N5B7 392 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 L3MBTL3Q96JM7 780 aaPredicted RBP20.06■□□□□ 0.8
GCFC2-202ENST00000409857 PDLIM2Q96JY6 352 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 TPM2P07951 284 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 SPTY2D1Q68D10 685 aaPredicted RBP20.06■□□□□ 0.8
GCFC2-202ENST00000409857 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 SNRKQ9NRH2 765 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 JAG2Q9Y219 1238 aa20.06■□□□□ 0.8
GCFC2-202ENST00000409857 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
GCFC2-202ENST00000409857 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
GCFC2-202ENST00000409857 PAG1Q9NWQ8 432 aa20.05■□□□□ 0.8
GCFC2-202ENST00000409857 GJA3Q9Y6H8 435 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms