RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 MAST3O60307 1309 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
PMS1-204ENST00000409823 ZMYM1Q5SVZ6 1142 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
PMS1-204ENST00000409823 CXCL9Q07325 125 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 ZGPATQ8N5A5 531 aaKnown RBP15.15■□□□□ 0.02
PMS1-204ENST00000409823 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
PMS1-204ENST00000409823 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 RUFY2Q8WXA3 655 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 APPBP2Q92624 585 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
PMS1-204ENST00000409823 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
PMS1-204ENST00000409823 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
PMS1-204ENST00000409823 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
PMS1-204ENST00000409823 AATFQ9NY61 560 aaKnown RBP eCLIP15.14■□□□□ 0.01
PMS1-204ENST00000409823 LTBP3Q9NS15 1303 aa15.14■□□□□ 0.01
PMS1-204ENST00000409823 LMNB1P20700 586 aa15.14■□□□□ 0.01
PMS1-204ENST00000409823 PTH1RQ03431 593 aa15.14■□□□□ 0.01
PMS1-204ENST00000409823 UBE3CQ15386 1083 aa15.14■□□□□ 0.01
PMS1-204ENST00000409823 ARMT1Q9H993 441 aa15.14■□□□□ 0.01
PMS1-204ENST00000409823 MBD4O95243 580 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
PMS1-204ENST00000409823 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 PCDHAC2Q9Y5I4 1007 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 GJA3Q9Y6H8 435 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 GPAA1O43292 621 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 LCORLQ8N3X6 602 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
PMS1-204ENST00000409823 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
PMS1-204ENST00000409823 RFX7Q2KHR2 1363 aa15.12■□□□□ 0.01
PMS1-204ENST00000409823 PRKAB2O43741 272 aa15.12■□□□□ 0.01
PMS1-204ENST00000409823 RBM5P52756 815 aaKnown RBP eCLIP15.12■□□□□ 0.01
PMS1-204ENST00000409823 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
PMS1-204ENST00000409823 ZNF541Q9H0D2 1346 aa15.12■□□□□ 0.01
PMS1-204ENST00000409823 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 REC8O95072 547 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 CIAPIN1Q6FI81 312 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 RSBN1LQ6PCB5 846 aaPredicted RBP15.11■□□□□ 0.01
PMS1-204ENST00000409823 TSHZ2Q9NRE2 1034 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 APPP05067 770 aa15.11■□□□□ 0.01
PMS1-204ENST00000409823 VIL1P09327 827 aaKnown RBP15.11■□□□□ 0.01
PMS1-204ENST00000409823 LSG1Q9H089 658 aaKnown RBP15.11■□□□□ 0.01
PMS1-204ENST00000409823 EIF6P56537 245 aaKnown RBP15.1■□□□□ 0.01
PMS1-204ENST00000409823 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 USP26Q9BXU7 913 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
PMS1-204ENST00000409823 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 FZD9O00144 591 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 ZBTB22O15209 634 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
PMS1-204ENST00000409823 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
PMS1-204ENST00000409823 HSPD1P10809 573 aaKnown RBP15.09■□□□□ 0.01
PMS1-204ENST00000409823 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
PMS1-204ENST00000409823 RAD50Q92878 1312 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 FOXP2O15409 715 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 BTDP43251 543 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 C22orf23Q9BZE7 217 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 MROH7-TTC4A0A0A0MT08 1334 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 MYH7P12883 1935 aa15.09■□□□□ 0.01
PMS1-204ENST00000409823 GSTO1P78417 241 aa15.08■□□□□ 0.01
PMS1-204ENST00000409823 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0.01
PMS1-204ENST00000409823 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0.01
PMS1-204ENST00000409823 CRKP46108 304 aa15.08■□□□□ 0
PMS1-204ENST00000409823 TEKT1Q969V4 418 aa15.08■□□□□ 0
PMS1-204ENST00000409823 GRIN3BO60391 1043 aa15.07■□□□□ 0
PMS1-204ENST00000409823 TNIP1Q15025 636 aa15.07■□□□□ 0
PMS1-204ENST00000409823 SUGT1Q9Y2Z0 365 aa15.07■□□□□ 0
PMS1-204ENST00000409823 GMPSP49915 693 aaPredicted RBP15.07■□□□□ 0
PMS1-204ENST00000409823 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
PMS1-204ENST00000409823 OGFOD1Q8N543 542 aa15.07■□□□□ 0
PMS1-204ENST00000409823 GMLQ99445 158 aa15.07■□□□□ 0
PMS1-204ENST00000409823 PALD1Q9ULE6 856 aa15.07■□□□□ 0
PMS1-204ENST00000409823 RBM8AQ9Y5S9 174 aaKnown RBP15.07■□□□□ 0
PMS1-204ENST00000409823 DDNO94850 711 aaPredicted RBP15.07■□□□□ 0
PMS1-204ENST00000409823 USP17L8P0C7I0 530 aa15.07■□□□□ 0
PMS1-204ENST00000409823 CACNB3P54284 484 aa15.07■□□□□ 0
PMS1-204ENST00000409823 TICAM2Q86XR7 235 aa15.07■□□□□ 0
PMS1-204ENST00000409823 TAF6LQ9Y6J9 622 aa15.07■□□□□ 0
PMS1-204ENST00000409823 EGFRP00533 1210 aa15.06■□□□□ 0
PMS1-204ENST00000409823 LDHCP07864 332 aa15.06■□□□□ 0
PMS1-204ENST00000409823 STK11IPQ8N1F8 1099 aa15.06■□□□□ 0
PMS1-204ENST00000409823 MAP4K1Q92918 833 aa15.06■□□□□ 0
PMS1-204ENST00000409823 NOL10Q9BSC4 688 aaKnown RBP15.06■□□□□ 0
PMS1-204ENST00000409823 FGAP02671 866 aa15.06■□□□□ 0
PMS1-204ENST00000409823 HAND2P61296 217 aa15.06■□□□□ 0
PMS1-204ENST00000409823 FKBP1AP62942 108 aaKnown RBP15.06■□□□□ 0
PMS1-204ENST00000409823 CFAP100Q494V2 611 aa15.06■□□□□ 0
PMS1-204ENST00000409823 APOBEC3HQ6NTF7 200 aaKnown RBP15.06■□□□□ 0
PMS1-204ENST00000409823 EPB41L4AQ9HCS5 686 aaPredicted RBP15.06■□□□□ 0
PMS1-204ENST00000409823 ADAMTSL1Q8N6G6 1762 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms