RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 NWD1Q149M9 1564 aa8.78□□□□□ -1
LSM5-203ENST00000409782 MYO5BQ9ULV0 1848 aa8.78□□□□□ -1
LSM5-203ENST00000409782 PLEKHG1Q9ULL1 1385 aa8.78□□□□□ -1
LSM5-203ENST00000409782 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
LSM5-203ENST00000409782 ADAMTS2O95450 1211 aa8.78□□□□□ -1
LSM5-203ENST00000409782 BMP4P12644 408 aa8.78□□□□□ -1
LSM5-203ENST00000409782 CDK11BP21127 795 aaKnown RBP8.78□□□□□ -1
LSM5-203ENST00000409782 MAP2K3P46734 347 aa8.78□□□□□ -1
LSM5-203ENST00000409782 IER5Q5VY09 327 aa8.78□□□□□ -1
LSM5-203ENST00000409782 KLRG1Q96E93 195 aa8.78□□□□□ -1
LSM5-203ENST00000409782 SETDB2Q96T68 719 aa8.78□□□□□ -1
LSM5-203ENST00000409782 KLK14Q9P0G3 267 aa8.78□□□□□ -1
LSM5-203ENST00000409782 MARK1Q9P0L2 795 aa8.78□□□□□ -1
LSM5-203ENST00000409782 PPP1R1BQ9UD71 204 aaPredicted RBP8.78□□□□□ -1
LSM5-203ENST00000409782 LRRC7Q96NW7 1537 aa8.78□□□□□ -1
LSM5-203ENST00000409782 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
LSM5-203ENST00000409782 NKTRP30414 1462 aaKnown RBP8.77□□□□□ -1
LSM5-203ENST00000409782 EFSO43281 561 aa8.77□□□□□ -1.01
LSM5-203ENST00000409782 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
LSM5-203ENST00000409782 BTLAQ7Z6A9 289 aa8.77□□□□□ -1.01
LSM5-203ENST00000409782 NOP9Q86U38 636 aaKnown RBP8.77□□□□□ -1.01
LSM5-203ENST00000409782 ZSCAN1Q8NBB4 408 aa8.77□□□□□ -1.01
LSM5-203ENST00000409782 PRKAG2Q9UGJ0 569 aa8.77□□□□□ -1.01
LSM5-203ENST00000409782 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.77□□□□□ -1.01
LSM5-203ENST00000409782 CLTCL1P53675 1640 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
LSM5-203ENST00000409782 SMARCA5O60264 1052 aaPredicted RBP8.76□□□□□ -1.01
LSM5-203ENST00000409782 CTSHP09668 335 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 CD33P20138 364 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 CTBSQ01459 385 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 FAM182BQ5T319 152 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 DPH6Q7L8W6 267 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 BRD7Q9NPI1 651 aa8.76□□□□□ -1.01
LSM5-203ENST00000409782 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
LSM5-203ENST00000409782 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
LSM5-203ENST00000409782 TYRO3Q06418 890 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 TREML1Q86YW5 311 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 ZNF654Q8IZM8 581 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
LSM5-203ENST00000409782 CAPN10Q9HC96 672 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 PRR12Q9ULL5 1215 aa8.75□□□□□ -1.01
LSM5-203ENST00000409782 UBAP1LF5GYI3 381 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 CPNE3O75131 537 aaKnown RBP8.74□□□□□ -1.01
LSM5-203ENST00000409782 EPB42P16452 691 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 XKR5Q6UX68 686 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 NUDT16Q96DE0 195 aaKnown RBP8.74□□□□□ -1.01
LSM5-203ENST00000409782 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 KCNH4Q9UQ05 1017 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
LSM5-203ENST00000409782 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 ALKQ9UM73 1620 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 ADAMTS13Q76LX8 1427 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
LSM5-203ENST00000409782 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
LSM5-203ENST00000409782 ORC1Q13415 861 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 SOGA3Q5TF21 947 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 OXCT2Q9BYC2 517 aaPredicted RBP8.73□□□□□ -1.01
LSM5-203ENST00000409782 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 NEXMIFQ5QGS0 1516 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
LSM5-203ENST00000409782 C2CD2LO14523 706 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 TOM1O60784 492 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 MICAL2O94851 1124 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 KCNA6P17658 529 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
LSM5-203ENST00000409782 IDH3AP50213 366 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 KCNQ4P56696 695 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 TTC16Q8NEE8 873 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 C12orf49Q9H741 205 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
LSM5-203ENST00000409782 KIF1BO60333 1816 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 NRXN3Q9Y4C0 1643 aa8.72□□□□□ -1.01
LSM5-203ENST00000409782 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.01
LSM5-203ENST00000409782 XIRP1Q702N8 1843 aaKnown RBP8.71□□□□□ -1.01
LSM5-203ENST00000409782 ARSDP51689 593 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 ARID5AQ03989 594 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 RBL2Q08999 1139 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 HS2ST1Q7LGA3 356 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 GOLGA6L1Q8N7Z2 621 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 GPR152Q8TDT2 470 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
LSM5-203ENST00000409782 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
LSM5-203ENST00000409782 OPLAHO14841 1288 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 ARAFP10398 606 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 BCRP11274 1271 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 PDE12Q6L8Q7 609 aaKnown RBP8.7□□□□□ -1.02
LSM5-203ENST00000409782 SNX29Q8TEQ0 813 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 ACDQ96AP0 544 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 LNPKQ9C0E8 428 aa8.7□□□□□ -1.02
LSM5-203ENST00000409782 AVENQ9NQS1 362 aaPredicted RBP8.7□□□□□ -1.02
LSM5-203ENST00000409782 ENAMQ9NRM1 1142 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms