RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 TTLL7Q6ZT98 887 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 RRAGCQ9HB90 399 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ZNF277Q9NRM2 450 aaPredicted RBP7.32□□□□□ -1.24
PBRM1-207ENST00000409767 MRE11P49959 708 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 PABPC4Q13310 644 aaKnown RBP eCLIP7.32□□□□□ -1.24
PBRM1-207ENST00000409767 CCDC83Q8IWF9 413 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ERMNQ8TAM6 284 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ZBTB40Q9NUA8 1239 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 MYO6Q9UM54 1294 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ZBTB43O43298 467 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ITPK1Q13572 414 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 ZBTB38Q8NAP3 1195 aaPredicted RBP7.32□□□□□ -1.24
PBRM1-207ENST00000409767 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 MYO3BQ8WXR4 1341 aa7.32□□□□□ -1.24
PBRM1-207ENST00000409767 COL14A1Q05707 1796 aaKnown RBP7.32□□□□□ -1.24
PBRM1-207ENST00000409767 CTAGE5O15320 804 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TRAK2O60296 914 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 PCCAP05165 728 aaPredicted RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 POTEJP0CG39 1038 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 CALML3P27482 149 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 SLC10A4Q96EP9 437 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 CALML4Q96GE6 196 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 SCLT1Q96NL6 688 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 NAP1L4Q99733 375 aaKnown RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TSG101Q99816 390 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 UPF3BQ9BZI7 483 aaKnown RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TRIM5Q9C035 493 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TMOD4Q9NZQ9 345 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TFCP2Q12800 502 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TTLL5Q6EMB2 1281 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 PIBF1Q8WXW3 757 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 KCNQ3O43525 872 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 GYS1P13807 737 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 KANK3Q6NY19 840 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 PPFIBP1Q86W92 1011 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 CRAMP1Q96RY5 1269 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 GLT8D2Q9H1C3 349 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 NUP62CLQ9H1M0 184 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 MCM9Q9NXL9 1143 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 ORC3Q9UBD5 711 aaPredicted RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 ZNRF3Q9ULT6 936 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 GTF2IP78347 998 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 ZNF827Q17R98 1081 aa7.31□□□□□ -1.24
PBRM1-207ENST00000409767 ZSCAN16Q9H4T2 348 aaPredicted RBP7.31□□□□□ -1.24
PBRM1-207ENST00000409767 SIGLEC1Q9BZZ2 1709 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 MATR3P43243 847 aaKnown RBP eCLIP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 RTN1Q16799 776 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 PDILTQ8N807 584 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 SDSP20132 328 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 PRR5LQ6MZQ0 368 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 SMC5Q8IY18 1101 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 TEX11Q8IYF3 940 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 HELBQ8NG08 1087 aaPredicted RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 ESYT1Q9BSJ8 1104 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 IQSEC3Q9UPP2 1182 aaPredicted RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 A0A1B0GUL7 405 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 USP17L3A6NCW0 530 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 USP17L4A6NCW7 530 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 SERPINC1P01008 464 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 PDE4CQ08493 712 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 PICALMQ13492 652 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 KRT24Q2M2I5 525 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 CAVIN1Q6NZI2 390 aaKnown RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 USP17L1Q7RTZ2 530 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 KRT26Q7Z3Y9 468 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 MAGEB6Q8N7X4 407 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 TANGO6Q9C0B7 1094 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 PA2G4Q9UQ80 394 aaKnown RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 EIF5P55010 431 aaKnown RBP7.3□□□□□ -1.24
PBRM1-207ENST00000409767 CTSWP56202 376 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 TNNI3KQ59H18 835 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 SP8Q8IXZ3 490 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 TEKT1Q969V4 418 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 C6orf50Q9HD87 102 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 FPGT-TNNI3KV9GXZ4 949 aa7.3□□□□□ -1.24
PBRM1-207ENST00000409767 ADGRB1O14514 1584 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 LRP6O75581 1613 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 ZBTB7BO15156 539 aaPredicted RBP7.29□□□□□ -1.24
PBRM1-207ENST00000409767 CDR1P51861 262 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 HAND2P61296 217 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 MICU3Q86XE3 530 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
PBRM1-207ENST00000409767 DBNDD1Q9H9R9 158 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 RBM28Q9NW13 759 aaKnown RBP7.29□□□□□ -1.24
PBRM1-207ENST00000409767 PNMA2Q9UL42 364 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 RBM8AQ9Y5S9 174 aaKnown RBP7.29□□□□□ -1.24
PBRM1-207ENST00000409767 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 PNPLA7Q6ZV29 1317 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 KDRP35968 1356 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 PPP2R5BQ15173 497 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
PBRM1-207ENST00000409767 CCAR2Q8N163 923 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms