RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 DMTNQ08495 405 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 TAF3Q5VWG9 929 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 KRT40Q6A162 431 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 GJB4Q9NTQ9 266 aa12.46□□□□□ -0.41
PCDHAC1-202ENST00000409700 KARSQ15046 597 aaKnown RBP12.46□□□□□ -0.42
PCDHAC1-202ENST00000409700 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.42
PCDHAC1-202ENST00000409700 RTEL1Q9NZ71 1219 aa12.46□□□□□ -0.42
PCDHAC1-202ENST00000409700 KCNH3Q9ULD8 1083 aa12.46□□□□□ -0.42
PCDHAC1-202ENST00000409700 SLC5A1P13866 664 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 CDC25BP30305 580 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 RTN1Q16799 776 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 AK7Q96M32 723 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 ACBD3Q9H3P7 528 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 MARCH6O60337 910 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 ERLIN1O75477 346 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 STX17P56962 302 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 ST3GAL1Q11201 340 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 PNOCQ13519 176 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 SKIDA1Q1XH10 827 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 CCDC70Q6NSX1 233 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 ERBB3P21860 1342 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 OSBP2Q969R2 916 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
PCDHAC1-202ENST00000409700 ADORA1P30542 326 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 PTPN21Q16825 1174 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 LINC00301Q8NCQ3 95 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 GNL3LQ9NVN8 582 aaKnown RBP12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 M0R2C6 588 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 DHX58Q96C10 678 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 TUBB4AP04350 444 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 LZTFL1Q9NQ48 299 aa12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
PCDHAC1-202ENST00000409700 A0A1W2PQ27 194 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 A0A1W2PQ64 194 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 JAKMIP3Q5VZ66 844 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 RNF41Q9H4P4 317 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 CLIC6Q96NY7 704 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 CWC15Q9P013 229 aaKnown RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 CALCOCO1Q9P1Z2 691 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 CMA1P23946 247 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 EVCP57679 992 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 KRT23Q9C075 422 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
PCDHAC1-202ENST00000409700 ITGA6P23229 1130 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 SARM1Q6SZW1 724 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 NAP1L1P55209 391 aaKnown RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 KCNB2Q92953 911 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 NFE2L3Q9Y4A8 694 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 MBD4O95243 580 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 DIS3L2Q8IYB7 885 aaKnown RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 AIFM3Q96NN9 605 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
PCDHAC1-202ENST00000409700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms