RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CYP11A1P05108 521 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 XRCC5P13010 732 aaKnown RBP7.38□□□□□ -1.23
PMS1-203ENST00000409593 FAAP100Q0VG06 881 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 RPS26P11Q5JNZ5 115 aaPredicted RBP7.38□□□□□ -1.23
PMS1-203ENST00000409593 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 DZIP1LQ8IYY4 767 aaKnown RBP7.38□□□□□ -1.23
PMS1-203ENST00000409593 CORO1BQ9BR76 489 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 OSBPL7Q9BZF2 842 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
PMS1-203ENST00000409593 SART1O43290 800 aaKnown RBP7.37□□□□□ -1.23
PMS1-203ENST00000409593 PRPF40AO75400 957 aaKnown RBP7.37□□□□□ -1.23
PMS1-203ENST00000409593 MAOBP27338 520 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 GSTT1P30711 240 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 POU4F3Q15319 338 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 NKAPLQ5M9Q1 402 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 UBL7Q96S82 380 aaPredicted RBP7.37□□□□□ -1.23
PMS1-203ENST00000409593 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
PMS1-203ENST00000409593 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 ZFYVE1Q9HBF4 777 aa7.37□□□□□ -1.23
PMS1-203ENST00000409593 DYRK3O43781 588 aa7.36□□□□□ -1.23
PMS1-203ENST00000409593 COL19A1Q14993 1142 aa7.36□□□□□ -1.23
PMS1-203ENST00000409593 UTP4Q969X6 686 aaKnown RBP7.36□□□□□ -1.23
PMS1-203ENST00000409593 NRSN2Q9GZP1 204 aa7.36□□□□□ -1.23
PMS1-203ENST00000409593 C12orf49Q9H741 205 aa7.36□□□□□ -1.23
PMS1-203ENST00000409593 ECEL1O95672 775 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 DLGAP3O95886 979 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 FGD1P98174 961 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 ANKRD34AQ69YU3 496 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 DUSP9Q99956 384 aaKnown RBP7.35□□□□□ -1.23
PMS1-203ENST00000409593 GIPC1O14908 333 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 CTSBP07858 339 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 GNA15P30679 374 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 PREPP48147 710 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 PPP2R3AQ06190 1150 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 AP3B2Q13367 1082 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 TPTE2Q6XPS3 522 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 TMPRSS13Q9BYE2 586 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 CYP4F12Q9HCS2 524 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 RNF19AQ9NV58 838 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 TMEM39AQ9NV64 488 aa7.35□□□□□ -1.23
PMS1-203ENST00000409593 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
PMS1-203ENST00000409593 FBXO24O75426 580 aa7.34□□□□□ -1.23
PMS1-203ENST00000409593 USP17L7P0C7H9 530 aa7.34□□□□□ -1.23
PMS1-203ENST00000409593 UVSSAQ2YD98 709 aa7.34□□□□□ -1.23
PMS1-203ENST00000409593 EXOSC6Q5RKV6 272 aaKnown RBP7.34□□□□□ -1.23
PMS1-203ENST00000409593 HP1BP3Q5SSJ5 553 aaPredicted RBP7.34□□□□□ -1.23
PMS1-203ENST00000409593 C12orf50Q8NA57 414 aaPredicted RBP7.34□□□□□ -1.23
PMS1-203ENST00000409593 ZC3H12CQ9C0D7 883 aaKnown RBP7.34□□□□□ -1.23
PMS1-203ENST00000409593 FAM8A1Q9UBU6 413 aa7.34□□□□□ -1.23
PMS1-203ENST00000409593 MEGF11A6BM72 1044 aa7.33□□□□□ -1.24
PMS1-203ENST00000409593 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
PMS1-203ENST00000409593 H2AFB2P0C5Z0 115 aa7.33□□□□□ -1.24
PMS1-203ENST00000409593 EIF4BP23588 611 aaKnown RBP7.33□□□□□ -1.24
PMS1-203ENST00000409593 PRR23CQ6ZRP0 262 aa7.33□□□□□ -1.24
PMS1-203ENST00000409593 FAM46AQ96IP4 442 aaKnown RBP7.33□□□□□ -1.24
PMS1-203ENST00000409593 RAD18Q9NS91 495 aa7.33□□□□□ -1.24
PMS1-203ENST00000409593 DHX15O43143 795 aaKnown RBP7.32□□□□□ -1.24
PMS1-203ENST00000409593 ARMC10Q8N2F6 343 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 FRMD6Q96NE9 622 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 DRD2P14416 443 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 ERCC3P19447 782 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 XPCQ01831 940 aaPredicted RBP7.32□□□□□ -1.24
PMS1-203ENST00000409593 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 MYRFLQ96LU7 910 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 KCNF1Q9H3M0 494 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 PARP2Q9UGN5 583 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 PPM1HQ9ULR3 514 aa7.32□□□□□ -1.24
PMS1-203ENST00000409593 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
PMS1-203ENST00000409593 PSMD2Q13200 908 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.31□□□□□ -1.24
PMS1-203ENST00000409593 SULF2Q8IWU5 870 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 SMG8Q8ND04 991 aaKnown RBP7.31□□□□□ -1.24
PMS1-203ENST00000409593 SUGCTQ9HAC7 445 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 AP4E1Q9UPM8 1137 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 RAXQ9Y2V3 346 aa7.31□□□□□ -1.24
PMS1-203ENST00000409593 GSTP1P09211 210 aaKnown RBP7.3□□□□□ -1.24
PMS1-203ENST00000409593 BMP3P12645 472 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 PRSS36Q5K4E3 855 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 FBXO33Q7Z6M2 555 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 KCNB2Q92953 911 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 FAM161BQ96MY7 647 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 CEP44Q9C0F1 390 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 CBX8Q9HC52 389 aa7.3□□□□□ -1.24
PMS1-203ENST00000409593 TIAF1O95411 115 aa7.29□□□□□ -1.24
PMS1-203ENST00000409593 ADH5P11766 374 aa7.29□□□□□ -1.24
PMS1-203ENST00000409593 RXRBP28702 533 aa7.29□□□□□ -1.24
PMS1-203ENST00000409593 TAGLNQ01995 201 aaKnown RBP7.29□□□□□ -1.24
PMS1-203ENST00000409593 NECAB3Q96P71 396 aaPredicted RBP7.29□□□□□ -1.24
PMS1-203ENST00000409593 STOML1Q9UBI4 398 aa7.29□□□□□ -1.24
PMS1-203ENST00000409593 LIG1P18858 919 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 ITGB7P26010 798 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 SOX4Q06945 474 aaPredicted RBP7.28□□□□□ -1.24
PMS1-203ENST00000409593 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 FAM20CQ8IXL6 584 aa7.28□□□□□ -1.24
PMS1-203ENST00000409593 CCDC86Q9H6F5 360 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms