RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 FSD2A1L4K1 749 aa28.4■■■□□ 2.14
SPIRE1-202ENST00000409402 TSNARE1Q96NA8 513 aa28.4■■■□□ 2.14
SPIRE1-202ENST00000409402 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
SPIRE1-202ENST00000409402 RLBP1P12271 317 aa28.4■■■□□ 2.14
SPIRE1-202ENST00000409402 ALDH1B1P30837 517 aa28.4■■■□□ 2.14
SPIRE1-202ENST00000409402 ZSCAN23Q3MJ62 389 aa28.39■■■□□ 2.14
SPIRE1-202ENST00000409402 ANO6Q4KMQ2 910 aa28.39■■■□□ 2.14
SPIRE1-202ENST00000409402 DNM1Q05193 864 aaKnown RBP28.39■■■□□ 2.14
SPIRE1-202ENST00000409402 LPIN2Q92539 896 aa28.39■■■□□ 2.14
SPIRE1-202ENST00000409402 PRPHP41219 470 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 ERVV-2B6SEH9 535 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 DACT1Q9NYF0 836 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 ZFYVE16Q7Z3T8 1539 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 DDX12PQ92771 950 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 SNX21Q969T3 373 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 TMEM87BQ96K49 555 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 MROH5Q6ZUA9 1318 aa28.38■■■□□ 2.13
SPIRE1-202ENST00000409402 NIM1KQ8IY84 436 aa28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 ZNF594Q96JF6 807 aaPredicted RBP28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 GIGYF2Q6Y7W6 1299 aaKnown RBP28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 BRDTQ58F21 947 aaPredicted RBP28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 HOMER2Q9NSB8 354 aa28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 SSX2IPQ9Y2D8 614 aa28.37■■■□□ 2.13
SPIRE1-202ENST00000409402 LRSAM1Q6UWE0 723 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 GNG11P61952 73 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 DBNDD2Q9BQY9 259 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 HSP90AA4PQ58FG1 418 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 APPBP2Q92624 585 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 IKBKGQ9Y6K9 419 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 CHL1O00533 1208 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 RGS22Q8NE09 1264 aa28.36■■■□□ 2.13
SPIRE1-202ENST00000409402 NEO1Q92859 1461 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 B4E1Z4 1266 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 TAF5LO75529 589 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 UBE4AQ14139 1066 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 IVNS1ABPQ9Y6Y0 642 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 MSANTD4Q8NCY6 345 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 DISP1Q96F81 1524 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 DPH6Q7L8W6 267 aa28.35■■■□□ 2.13
SPIRE1-202ENST00000409402 IQUBQ8NA54 791 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 GLT8D2Q9H1C3 349 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 LETM2Q2VYF4 491 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 PKD2L1Q9P0L9 805 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 ZBTB7BO15156 539 aaPredicted RBP28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 SMC5Q8IY18 1101 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 AOPEPQ8N6M6 819 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 TTC16Q8NEE8 873 aa28.34■■■□□ 2.13
SPIRE1-202ENST00000409402 AATFQ9NY61 560 aaKnown RBP eCLIP28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 PLEKHG3A1L390 1219 aa28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 FLAD1Q8NFF5 587 aa28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 FAM200AQ8TCP9 573 aa28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 SELENOOQ9BVL4 669 aa28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 USP19O94966 1318 aa28.33■■■□□ 2.13
SPIRE1-202ENST00000409402 CKAP4Q07065 602 aaKnown RBP28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 BBXQ8WY36 941 aaPredicted RBP28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 TAF12Q16514 161 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 INCENPQ9NQS7 918 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 GCKRQ14397 625 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 KLHDC4Q8TBB5 520 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 TBC1D22AQ8WUA7 517 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 PSMD1Q99460 953 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 NOD1Q9Y239 953 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 DEXIO95424 95 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 FCHSD1Q86WN1 690 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 CCDC65Q8IXS2 484 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 PZPP20742 1482 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 LMBR1Q8WVP7 490 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 CEP83Q9Y592 693 aa28.32■■■□□ 2.12
SPIRE1-202ENST00000409402 RPL13P26373 211 aaKnown RBP28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 CCDC24Q8N4L8 307 aa28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 CCDC129Q6ZRS4 1044 aa28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 SV2BQ7L1I2 683 aa28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 SUCLG2Q96I99 432 aa28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 ZNF496Q96IT1 587 aaPredicted RBP28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 CGNQ9P2M7 1197 aaKnown RBP28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 NPC1L1Q9UHC9 1359 aa28.31■■■□□ 2.12
SPIRE1-202ENST00000409402 MAATS1Q7Z4T9 603 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 NEK11Q8NG66 645 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 GPAA1O43292 621 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 AKNAD1Q5T1N1 836 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 SPATA5Q8NB90 893 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 PLIN2Q99541 437 aa28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 GPHNQ9NQX3 736 aaPredicted RBP28.3■■■□□ 2.12
SPIRE1-202ENST00000409402 ZYXQ15942 572 aaKnown RBP28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 DNAJC25Q9H1X3 360 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 ZBED4O75132 1171 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 RPS6KB1P23443 525 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 PLCD1P51178 756 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 EEF2P13639 858 aaKnown RBP28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 ARID5AQ03989 594 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 ZNF174Q15697 407 aa28.29■■■□□ 2.12
SPIRE1-202ENST00000409402 AOX1Q06278 1338 aa28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 DLGAP5Q15398 846 aa28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 ATL3Q6DD88 541 aa28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 RASAL2Q9UJF2 1139 aa28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 PPIP5K2O43314 1243 aa28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 CCT6AP40227 531 aaKnown RBP28.28■■■□□ 2.12
SPIRE1-202ENST00000409402 TACC1O75410 805 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms