RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 PTMAP06454 111 aaKnown RBP9.88□□□□□ -0.83
SH3D19-202ENST00000409252 BTDP43251 543 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 GPSM2P81274 684 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 USP17L1Q7RTZ2 530 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 RAB11FIP4Q86YS3 637 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 SP8Q8IXZ3 490 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 CHMP5Q9NZZ3 219 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 ZNF76P36508 570 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 CCDC83Q8IWF9 413 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 VAT1LQ9HCJ6 419 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 RAB3GAP1Q15042 981 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 FAM227BQ96M60 508 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 ECE2O60344 883 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 FOXO4P98177 505 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 POLA2Q14181 598 aa9.88□□□□□ -0.83
SH3D19-202ENST00000409252 PDE6AP16499 860 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 HAUS7Q99871 368 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 UBN2Q6ZU65 1347 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 CLRN2A0PK11 232 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 GRIN3BO60391 1043 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 CCT2P78371 535 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 SF3B3Q15393 1217 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 CUL5Q93034 780 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 PLA2G12BQ9BX93 195 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 NOL7Q9UMY1 257 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 STYK1Q6J9G0 422 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 LRRC4BQ9NT99 713 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 METAP2P50579 478 aaKnown RBP eCLIP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 LARP1BQ659C4 914 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 CCDC47Q96A33 483 aaKnown RBP9.87□□□□□ -0.83
SH3D19-202ENST00000409252 SH2D4AQ9H788 454 aa9.87□□□□□ -0.83
SH3D19-202ENST00000409252 HOMER1Q86YM7 354 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
SH3D19-202ENST00000409252 TCEANC2Q96MN5 208 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 SLC4A9Q96Q91 983 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 GZF1Q9H116 711 aaPredicted RBP9.86□□□□□ -0.83
SH3D19-202ENST00000409252 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
SH3D19-202ENST00000409252 PHRF1Q9P1Y6 1649 aaKnown RBP9.86□□□□□ -0.83
SH3D19-202ENST00000409252 KLF18A0A0U1RQI7 1052 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 DDX11L8A8MPP1 907 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 SNAP23O00161 211 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 PRC1O43663 620 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 SSRP1Q08945 709 aaKnown RBP9.86□□□□□ -0.83
SH3D19-202ENST00000409252 MTX1Q13505 466 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 BRF1Q92994 677 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 PXDNLA1KZ92 1463 aa9.86□□□□□ -0.83
SH3D19-202ENST00000409252 SASH1O94885 1247 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 ATP6V0A2Q9Y487 856 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 CREB3L3Q68CJ9 461 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 PI16Q6UXB8 463 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 TMTC2Q8N394 836 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 CDK5RAP3Q96JB5 506 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 ZNF396Q96N95 335 aaPredicted RBP9.85□□□□□ -0.83
SH3D19-202ENST00000409252 LRP6O75581 1613 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 KDM2BQ8NHM5 1336 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 CREBRFQ8IUR6 639 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 ZBTB43O43298 467 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 PRDM1O75626 825 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 STK38Q15208 465 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 DCAF15Q66K64 600 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 CCDC73Q6ZRK6 1079 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 PODNQ7Z5L7 613 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.85□□□□□ -0.838e-15■■■■■ 50.2
SH3D19-202ENST00000409252 TMOD4Q9NZQ9 345 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 CSADQ9Y600 493 aa9.85□□□□□ -0.83
SH3D19-202ENST00000409252 TPM4P67936 248 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
SH3D19-202ENST00000409252 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 CD209Q9NNX6 404 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 ARPP21Q9UBL0 812 aaPredicted RBP9.84□□□□□ -0.83
SH3D19-202ENST00000409252 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 MYO3BQ8WXR4 1341 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 HOOK1Q9UJC3 728 aaKnown RBP9.84□□□□□ -0.83
SH3D19-202ENST00000409252 USP17L8P0C7I0 530 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 IARSP41252 1262 aaKnown RBP9.84□□□□□ -0.83
SH3D19-202ENST00000409252 PLS1Q14651 629 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
SH3D19-202ENST00000409252 CHST3Q7LGC8 479 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 EHMT1Q9H9B1 1298 aa9.84□□□□□ -0.83
SH3D19-202ENST00000409252 TXLNAP40222 546 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 NLRP5P59047 1200 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 TGFB2P61812 414 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 ZYXQ15942 572 aaKnown RBP9.83□□□□□ -0.84
SH3D19-202ENST00000409252 RTN1Q16799 776 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 SIRT2Q8IXJ6 389 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 TBC1D16Q8TBP0 767 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 CCDC12Q8WUD4 166 aaPredicted RBP9.83□□□□□ -0.84
SH3D19-202ENST00000409252 SDR42E1Q8WUS8 393 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 ZKSCAN3Q9BRR0 538 aa9.83□□□□□ -0.84
SH3D19-202ENST00000409252 DDX49Q9Y6V7 483 aaKnown RBP9.83□□□□□ -0.84
SH3D19-202ENST00000409252 DISP2A7MBM2 1401 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms