RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ZEB2O60315 1214 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 ENOX2Q16206 610 aaKnown RBP5.73□□□□□ -1.49
SCN3A-203ENST00000409101 ERFEQ4G0M1 354 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 FAM47CQ5HY64 1035 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CC2D2BQ6DHV5 1058 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 ARHGEF25Q86VW2 580 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 CPXCR1Q8N123 301 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 TBC1D5Q92609 795 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 SHROOM2Q13796 1616 aa5.73□□□□□ -1.49
SCN3A-203ENST00000409101 USP19O94966 1318 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 IL6STP40189 918 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 IREB2P48200 963 aaKnown RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PDE1AP54750 535 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 HSP90B2PQ58FF3 399 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 FCHSD1Q86WN1 690 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 NCAPG2Q86XI2 1143 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 KIFC2Q96AC6 838 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ASAP1Q9ULH1 1129 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PALLDQ8WX93 1383 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PSDA5PKW4 1024 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CCDC172P0C7W6 258 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 SDSP20132 328 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 NUCB1Q02818 461 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CFAP100Q494V2 611 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 NSMFQ6X4W1 530 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ZBTB38Q8NAP3 1195 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 LRRC2Q9BYS8 371 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 TAOK3Q9H2K8 898 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ANO10Q9NW15 660 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 GCC2Q8IWJ2 1684 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 DNM2P50570 870 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 FSIP1Q8NA03 581 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 MASTLQ96GX5 879 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ERCC6L2Q5T890 1561 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ERBB4Q15303 1308 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CDC42BPGQ6DT37 1551 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PPFIA3O75145 1194 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 BBOX1O75936 387 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CIAPIN1Q6FI81 312 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CEP85Q6P2H3 762 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 DPH6Q7L8W6 267 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 DHX37Q8IY37 1157 aaKnown RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 SUCLG2Q96I99 432 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PARD3Q8TEW0 1356 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 OVOS2A0A0G2JMS6 1433 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 OVOS2A0A0J9YW53 1432 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 OVOS2Q6IE36 1432 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 NLRX1Q86UT6 975 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 CDAN1Q8IWY9 1227 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 ZKSCAN3Q9BRR0 538 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 COMMD10Q9Y6G5 202 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 RAD50Q92878 1312 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 PTPRTO14522 1441 aa5.72□□□□□ -1.49
SCN3A-203ENST00000409101 GOLGA6L10A6NI86 522 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 CTAGE5O15320 804 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 MMP10P09238 476 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 HDAC1Q13547 482 aaPredicted RBP5.71□□□□□ -1.49
SCN3A-203ENST00000409101 CHURC1Q8WUH1 139 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 CTNNBL1Q8WYA6 563 aaPredicted RBP5.71□□□□□ -1.49
SCN3A-203ENST00000409101 RNF181Q9P0P0 153 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 CIZ1Q9ULV3 898 aaPredicted RBP5.71□□□□□ -1.49
SCN3A-203ENST00000409101 LEMD3Q9Y2U8 911 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 STK24Q9Y6E0 443 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 ABCC3O15438 1527 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 CHMP2AO43633 222 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 GRIN3BO60391 1043 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 TIMM10P62072 90 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 TDRD12Q587J7 1177 aaKnown RBP5.71□□□□□ -1.49
SCN3A-203ENST00000409101 BMP2KLQ5H9B9 411 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 TEX35Q5T0J7 233 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 G2E3Q7L622 706 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 IFT74Q96LB3 600 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 PANK2Q9BZ23 570 aa5.71□□□□□ -1.49
SCN3A-203ENST00000409101 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.49
SCN3A-203ENST00000409101 ZNF804BA4D1E1 1349 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 TNS3Q68CZ2 1445 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 PCCAP05165 728 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 KCNQ4P56696 695 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 CHRNDQ07001 517 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 USH1GQ495M9 461 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 HACE1Q8IYU2 909 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 KDRP35968 1356 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 BTDP43251 543 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 USP14P54578 494 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 STRN3Q13033 797 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 ARHGEF16Q5VV41 709 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 DPP9Q86TI2 863 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 NUP88Q99567 741 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 PNMA2Q9UL42 364 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 SSX2IPQ9Y2D8 614 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 KDM5AP29375 1690 aaKnown RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 ATP7BP35670 1465 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 NEURL1BA8MQ27 555 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 ZBTB24O43167 697 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 GRIPAP1Q4V328 841 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 CHL1O00533 1208 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 NR1I2O75469 434 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 YEATS4O95619 227 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms