RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 RBM5P52756 815 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRAME-206ENST00000406503 INHBEP58166 350 aa16.29■□□□□ 0.2
PRAME-206ENST00000406503 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
PRAME-206ENST00000406503 FBXO33Q7Z6M2 555 aa16.29■□□□□ 0.2
PRAME-206ENST00000406503 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
PRAME-206ENST00000406503 CRKP46108 304 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 CRHR2Q13324 411 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.28■□□□□ 0.2
PRAME-206ENST00000406503 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 DZIP1LQ8IYY4 767 aaKnown RBP16.28■□□□□ 0.2
PRAME-206ENST00000406503 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
PRAME-206ENST00000406503 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
PRAME-206ENST00000406503 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
PRAME-206ENST00000406503 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.2
PRAME-206ENST00000406503 MROH5Q6ZUA9 1318 aa16.27■□□□□ 0.2
PRAME-206ENST00000406503 DOCK2Q92608 1830 aa16.27■□□□□ 0.2
PRAME-206ENST00000406503 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
PRAME-206ENST00000406503 IREB2P48200 963 aaKnown RBP16.27■□□□□ 0.2
PRAME-206ENST00000406503 PRPF38BQ5VTL8 546 aaKnown RBP16.27■□□□□ 0.2
PRAME-206ENST00000406503 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
PRAME-206ENST00000406503 TRIM17Q9Y577 477 aa16.27■□□□□ 0.2
PRAME-206ENST00000406503 PTPRFP10586 1907 aa16.27■□□□□ 0.19
PRAME-206ENST00000406503 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
PRAME-206ENST00000406503 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
PRAME-206ENST00000406503 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
PRAME-206ENST00000406503 ELP3Q9H9T3 547 aa16.26■□□□□ 0.19
PRAME-206ENST00000406503 MGAMO43451 1857 aa16.26■□□□□ 0.19
PRAME-206ENST00000406503 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
PRAME-206ENST00000406503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRAME-206ENST00000406503 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
PRAME-206ENST00000406503 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 PDE8BO95263 885 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 FGFR2P21802 821 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 CACNB3P54284 484 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 VGLL4Q14135 290 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 PHIPQ8WWQ0 1821 aa16.24■□□□□ 0.19
PRAME-206ENST00000406503 RFX5P48382 616 aaPredicted RBP16.23■□□□□ 0.19
PRAME-206ENST00000406503 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
PRAME-206ENST00000406503 METTL24Q5JXM2 366 aa16.23■□□□□ 0.19
PRAME-206ENST00000406503 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
PRAME-206ENST00000406503 PTPN22Q9Y2R2 807 aa16.23■□□□□ 0.19
PRAME-206ENST00000406503 PTPRCP08575 1304 aa16.22■□□□□ 0.19
PRAME-206ENST00000406503 BCAMP50895 628 aa16.22■□□□□ 0.19
PRAME-206ENST00000406503 HDLBPQ00341 1268 aaKnown RBP16.22■□□□□ 0.19
PRAME-206ENST00000406503 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
PRAME-206ENST00000406503 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
PRAME-206ENST00000406503 SZT2Q5T011 3432 aa16.22■□□□□ 0.19
PRAME-206ENST00000406503 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
PRAME-206ENST00000406503 APOBEC3HQ6NTF7 200 aaKnown RBP16.21■□□□□ 0.19
PRAME-206ENST00000406503 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
PRAME-206ENST00000406503 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
PRAME-206ENST00000406503 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 SPDYE5A6NIY4 337 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 SP3Q02447 781 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
PRAME-206ENST00000406503 CEP290O15078 2479 aa16.2■□□□□ 0.18
PRAME-206ENST00000406503 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 TNNI2P48788 182 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 CCL15Q16663 113 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 OTUD7BQ6GQQ9 843 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 VPS37DQ86XT2 251 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 TEKT1Q969V4 418 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 OTUD5Q96G74 571 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 MRIQ9BWK5 157 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 EFCC1Q9HA90 598 aa16.19■□□□□ 0.18
PRAME-206ENST00000406503 DOCK1Q14185 1865 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 RANBP2P49792 3224 aaKnown RBP16.18■□□□□ 0.18
PRAME-206ENST00000406503 ATAD5Q96QE3 1844 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 PUM3Q15397 648 aaKnown RBP16.18■□□□□ 0.18
PRAME-206ENST00000406503 ATG9AQ7Z3C6 839 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 ZKSCAN4Q969J2 545 aaPredicted RBP16.18■□□□□ 0.18
PRAME-206ENST00000406503 DOCK3Q8IZD9 2030 aa16.18■□□□□ 0.18
PRAME-206ENST00000406503 EYA2O00167 538 aa16.17■□□□□ 0.18
PRAME-206ENST00000406503 GTF2A2P52657 109 aa16.17■□□□□ 0.18
PRAME-206ENST00000406503 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
PRAME-206ENST00000406503 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
PRAME-206ENST00000406503 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
PRAME-206ENST00000406503 SUGT1Q9Y2Z0 365 aa16.17■□□□□ 0.18
PRAME-206ENST00000406503 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
PRAME-206ENST00000406503 E9PSI1 815 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 IRF6O14896 467 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
PRAME-206ENST00000406503 HHIPL2Q6UWX4 724 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 CDCA7LQ96GN5 454 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 WRNIP1Q96S55 665 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 CSADQ9Y600 493 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 PTCH2Q9Y6C5 1203 aa16.16■□□□□ 0.18
PRAME-206ENST00000406503 BTBD19C9JJ37 291 aa16.15■□□□□ 0.18
PRAME-206ENST00000406503 EN2P19622 333 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms