RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 MAP3K4Q9Y6R4 1608 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 CPSF1Q10570 1443 aaKnown RBP8.4□□□□□ -1.06
HDAC9-202ENST00000405010 CCDC196A0A1B0GTZ2 297 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 A0A1W2PQ27 194 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 A0A1W2PQ64 194 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 A0A1W2PQD8 194 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 KRT86O43790 486 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 ATP1A3P13637 1013 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-202ENST00000405010 MAGEA9P43362 315 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 TICAM2Q86XR7 235 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 OSCARQ8IYS5 282 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 MLKLQ8NB16 471 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.06
HDAC9-202ENST00000405010 PLCD4Q9BRC7 762 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 CNNM1Q9NRU3 951 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 CDC23Q9UJX2 597 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 ATP6V1AP38606 617 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 EPS15P42566 896 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 TFCP2Q12800 502 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 RRAGBQ5VZM2 374 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 MYO6Q9UM54 1294 aa8.4□□□□□ -1.06
HDAC9-202ENST00000405010 MYO1BO43795 1136 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 TADA3O75528 432 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 TRIM21P19474 475 aaKnown RBP8.4□□□□□ -1.07
HDAC9-202ENST00000405010 RXRAP19793 462 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 GBP2P32456 591 aaPredicted RBP8.4□□□□□ -1.07
HDAC9-202ENST00000405010 CCT6AP40227 531 aaKnown RBP8.4□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC122Q5T0U0 273 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 B4GALNT4Q76KP1 1039 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 TAF4BQ92750 862 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 DBNDD2Q9BQY9 259 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 IL25Q9H293 177 aa8.4□□□□□ -1.07
HDAC9-202ENST00000405010 GOLGA6BA6NDN3 693 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 TAF5LO75529 589 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 EZRP15311 586 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 CMA1P23946 247 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 LONRF3Q496Y0 759 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 SPECC1Q5M775 1068 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 NSUN7Q8NE18 718 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 ALS2CR12Q96Q35 445 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 NAPBQ9H115 298 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 MYO5CQ9NQX4 1742 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 IKBKBO14920 756 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 EFCAB13Q8IY85 973 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 PLEKHA4Q9H4M7 779 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 EIF3CLB5ME19 914 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 POLR2DO15514 142 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 CCT5P48643 541 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 KRT83P78385 493 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 AMOTQ4VCS5 1084 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 FKBP15Q5T1M5 1219 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 ARMCX5Q6P1M9 558 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 SRLQ86TD4 932 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 SEC62Q99442 399 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 EIF3CQ99613 913 aaKnown RBP8.39□□□□□ -1.07
HDAC9-202ENST00000405010 MTMR7Q9Y216 660 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 AKAP2Q9Y2D5 859 aa8.39□□□□□ -1.07
HDAC9-202ENST00000405010 PNPLA6Q8IY17 1366 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 WHAMMP3Q1A5X7 153 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC96Q2M329 555 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 LMBR1LQ6UX01 489 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 ZNF589Q86UQ0 364 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 TMTC1Q8IUR5 882 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 BCAS4Q8TDM0 211 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 XAGE3Q8WTP9 111 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 SUCLG2Q96I99 432 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 AKR1B10O60218 316 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 CUTAO60888 179 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 H2AFXP16104 143 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 MTIF2P46199 727 aaKnown RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 COPS6Q7L5N1 327 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 TAX1BP1Q86VP1 789 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 SLF1Q9BQI6 1058 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 VPS16Q9H269 839 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 A0A087WUV0 522 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 RNF113AO15541 343 aaKnown RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 KRT9P35527 623 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 TNNI3KQ59H18 835 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 DHX40Q8IX18 779 aaKnown RBP8.38□□□□□ -1.07
HDAC9-202ENST00000405010 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 GOLPH3LQ9H4A5 285 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
HDAC9-202ENST00000405010 FHOD1Q9Y613 1164 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms