RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 DSCC1Q9BVC3 393 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 COA1Q9GZY4 146 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 ARAP2Q8WZ64 1704 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 SLX4Q8IY92 1834 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 MAGEB6P1A0A0J9YX57 407 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 PPIP5K2O43314 1243 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 PRKAB2O43741 272 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 FGAP02671 866 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 CYP21A2P08686 494 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 IL1R1P14778 569 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 TGFB2P61812 414 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 DIXDC1Q155Q3 683 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 GRIK5Q16478 980 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 DALRD3Q5D0E6 543 aaKnown RBP4.43□□□□□ -1.7
RTN4-208ENST00000404909 LCORLQ8N3X6 602 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 ZGPATQ8N5A5 531 aaKnown RBP4.43□□□□□ -1.7
RTN4-208ENST00000404909 STRBPQ96SI9 672 aaKnown RBP4.43□□□□□ -1.7
RTN4-208ENST00000404909 MXD3Q9BW11 206 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 KCNQ5Q9NR82 932 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 FOXD4L1Q9NU39 408 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 AATFQ9NY61 560 aaKnown RBP eCLIP4.43□□□□□ -1.7
RTN4-208ENST00000404909 BCS1LQ9Y276 419 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 SLC4A4Q9Y6R1 1079 aa4.43□□□□□ -1.7
RTN4-208ENST00000404909 MYO5AQ9Y4I1 1855 aaKnown RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 PRKCSHP14314 528 aaPredicted RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 PTGER2P43116 358 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 DYNLL1P63167 89 aaKnown RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 CCDC93Q567U6 631 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 ZNF384Q8TF68 577 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 TCEANC2Q96MN5 208 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 LARP6Q9BRS8 491 aaKnown RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 SLKQ9H2G2 1235 aaPredicted RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 ZNF277Q9NRM2 450 aaPredicted RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 A0A1B0GUL6 1792 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 CACNA1SQ13698 1873 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 FOXP2O15409 715 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 CC2D2BQ6DHV5 1058 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 RTKN2Q8IZC4 609 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 STK11IPQ8N1F8 1099 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 SDR42E1Q8WUS8 393 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 SGIP1Q9BQI5 828 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 NAPBQ9H115 298 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 SPON1Q9HCB6 807 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 CTNNA3Q9UI47 895 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 PDS5AQ29RF7 1337 aaKnown RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 ECE2O60344 883 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 PSMA5P28066 241 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 TDO2P48775 406 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 COL9A3Q14050 684 aaPredicted RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 IMMTQ16891 758 aaKnown RBP4.42□□□□□ -1.7
RTN4-208ENST00000404909 CYP46A1Q9Y6A2 500 aa4.42□□□□□ -1.7
RTN4-208ENST00000404909 PATL2C9JE40 543 aaKnown RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 K7ELQ4 463 aaPredicted RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 ZNF213O14771 459 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 SLC4A8Q2Y0W8 1093 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 BLOC1S2Q6QNY1 142 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 PODNQ7Z5L7 613 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 IFNL3Q8IZI9 196 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 LARGE2Q8N3Y3 721 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 NLGN2Q8NFZ4 835 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 TBC1D22AQ8WUA7 517 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 SNX21Q969T3 373 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 NOL10Q9BSC4 688 aaKnown RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 NACAP1Q9BZK3 213 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 CD2APQ9Y5K6 639 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 SALL1Q9NSC2 1324 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 GSG1L2A8MUP6 293 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 GNAT2P19087 354 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 SCNN1DP51172 638 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 FGD1P98174 961 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 KIAA2012Q0VF49 1180 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 KRT32Q14532 448 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 RUFY3Q7L099 469 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 PIAS4Q8N2W9 510 aaPredicted RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 SUPT20HQ8NEM7 779 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 NEK1Q96PY6 1258 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 RIOK1Q9BRS2 568 aaKnown RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 RTFDC1Q9BY42 306 aaPredicted RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 LRRC2Q9BYS8 371 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 PDRG1Q9NUG6 133 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 TTF2Q9UNY4 1162 aaKnown RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 DUOX1Q9NRD9 1551 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 MINDY4BA8MYZ0 360 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 GSTO1P78417 241 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 STOX1Q6ZVD7 989 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 CHST3Q7LGC8 479 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 KIAA0825Q8IV33 1275 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 CERS5Q8N5B7 392 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 KCNB2Q92953 911 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 ZSWIM6Q9HCJ5 1215 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 EPB41L4AQ9HCS5 686 aaPredicted RBP4.41□□□□□ -1.7
RTN4-208ENST00000404909 TOMM22Q9NS69 142 aa4.41□□□□□ -1.7
RTN4-208ENST00000404909 FAM205AQ6ZU69 1335 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 LRRC37AA6NMS7 1700 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 E7EWF7 191 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 RAD17O75943 681 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 BAG3O95817 575 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 LDHCP07864 332 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 AK2P54819 239 aa4.4□□□□□ -1.7
RTN4-208ENST00000404909 CTDSPL2Q05D32 466 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms