RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 GLIS2Q9BZE0 524 aaPredicted RBP17.89■□□□□ 0.45
CDPF1-203ENST00000404583 SUGT1Q9Y2Z0 365 aa17.89■□□□□ 0.45
CDPF1-203ENST00000404583 PASKQ96RG2 1323 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 TRAF5O00463 557 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 PRDX5P30044 214 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 CRKP46108 304 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 CDC37L1Q7L3B6 337 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 USP48Q86UV5 1035 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 JMYQ8N9B5 988 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 PRMT6Q96LA8 375 aaPredicted RBP17.88■□□□□ 0.45
CDPF1-203ENST00000404583 SNRKQ9NRH2 765 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 ABCF2Q9UG63 623 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 SERPINA10Q9UK55 444 aa17.88■□□□□ 0.45
CDPF1-203ENST00000404583 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
CDPF1-203ENST00000404583 PDS5AQ29RF7 1337 aaKnown RBP17.87■□□□□ 0.45
CDPF1-203ENST00000404583 SALL1Q9NSC2 1324 aa17.87■□□□□ 0.45
CDPF1-203ENST00000404583 LDHBP07195 334 aaKnown RBP17.87■□□□□ 0.45
CDPF1-203ENST00000404583 IFIT2P09913 472 aaKnown RBP17.87■□□□□ 0.45
CDPF1-203ENST00000404583 DLK2Q6UY11 383 aa17.87■□□□□ 0.45
CDPF1-203ENST00000404583 ECM29Q5VYK3 1845 aa17.87■□□□□ 0.45
CDPF1-203ENST00000404583 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 HDAC1Q13547 482 aaPredicted RBP17.86■□□□□ 0.45
CDPF1-203ENST00000404583 TBC1D9Q6ZT07 1266 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
CDPF1-203ENST00000404583 ZNF512BQ96KM6 892 aaPredicted RBP17.86■□□□□ 0.45
CDPF1-203ENST00000404583 TRPM7Q96QT4 1865 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 AOX1Q06278 1338 aa17.86■□□□□ 0.45
CDPF1-203ENST00000404583 MYO5AQ9Y4I1 1855 aaKnown RBP17.85■□□□□ 0.45
CDPF1-203ENST00000404583 ADM5C9JUS6 153 aa17.85■□□□□ 0.45
CDPF1-203ENST00000404583 HDLBPQ00341 1268 aaKnown RBP17.85■□□□□ 0.45
CDPF1-203ENST00000404583 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
CDPF1-203ENST00000404583 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
CDPF1-203ENST00000404583 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
CDPF1-203ENST00000404583 MAST3O60307 1309 aa17.85■□□□□ 0.45
CDPF1-203ENST00000404583 ZAP70P43403 619 aa17.84■□□□□ 0.45
CDPF1-203ENST00000404583 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
CDPF1-203ENST00000404583 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
CDPF1-203ENST00000404583 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
CDPF1-203ENST00000404583 CLRN2A0PK11 232 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 MYO1BO43795 1136 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 CYP2E1P05181 493 aaPredicted RBP17.83■□□□□ 0.45
CDPF1-203ENST00000404583 DIXDC1Q155Q3 683 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 SPTY2D1Q68D10 685 aaPredicted RBP17.83■□□□□ 0.45
CDPF1-203ENST00000404583 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.45
CDPF1-203ENST00000404583 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.45
CDPF1-203ENST00000404583 IGHDP01880 384 aa17.82■□□□□ 0.44
CDPF1-203ENST00000404583 ZDHHC15Q96MV8 337 aa17.82■□□□□ 0.44
CDPF1-203ENST00000404583 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
CDPF1-203ENST00000404583 COL13A1Q5TAT6 717 aaPredicted RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 CST9Q5W186 159 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 APOBEC3HQ6NTF7 200 aaKnown RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 DZIP1Q86YF9 867 aaKnown RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 ZNF408Q9H9D4 720 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 LRP2BPQ9P2M1 347 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 TMEM88BA6NKF7 163 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 CELF2O95319 508 aaKnown RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 MECOMQ03112 1051 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 ANKRD45Q5TZF3 282 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 PRAMEF18Q5VWM3 479 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 APOBEC3FQ8IUX4 373 aaKnown RBP17.81■□□□□ 0.44
CDPF1-203ENST00000404583 ZNF384Q8TF68 577 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 RAI14Q9P0K7 980 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 DAGLAQ9Y4D2 1042 aa17.81■□□□□ 0.44
CDPF1-203ENST00000404583 HSPA1AP0DMV8 641 aaKnown RBP17.8■□□□□ 0.44
CDPF1-203ENST00000404583 HSPA1BP0DMV9 641 aaKnown RBP17.8■□□□□ 0.44
CDPF1-203ENST00000404583 SPDYE2Q495Y8 402 aa17.8■□□□□ 0.44
CDPF1-203ENST00000404583 CDCA5Q96FF9 252 aa17.8■□□□□ 0.44
CDPF1-203ENST00000404583 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
CDPF1-203ENST00000404583 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
CDPF1-203ENST00000404583 CREBZFQ9NS37 354 aa17.8■□□□□ 0.44
CDPF1-203ENST00000404583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDPF1-203ENST00000404583 NSUN4Q96CB9 384 aaKnown RBP17.79■□□□□ 0.44
CDPF1-203ENST00000404583 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
CDPF1-203ENST00000404583 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
CDPF1-203ENST00000404583 ATP5JP18859 108 aa17.78■□□□□ 0.44
CDPF1-203ENST00000404583 CACNB3P54284 484 aa17.78■□□□□ 0.44
CDPF1-203ENST00000404583 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
CDPF1-203ENST00000404583 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
CDPF1-203ENST00000404583 GAKO14976 1311 aa17.77■□□□□ 0.44
CDPF1-203ENST00000404583 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
CDPF1-203ENST00000404583 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.44
CDPF1-203ENST00000404583 SLF2Q8IX21 1173 aa17.77■□□□□ 0.44
CDPF1-203ENST00000404583 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
CDPF1-203ENST00000404583 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
CDPF1-203ENST00000404583 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
CDPF1-203ENST00000404583 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
CDPF1-203ENST00000404583 GSTO1P78417 241 aa17.76■□□□□ 0.43
CDPF1-203ENST00000404583 RASA3Q14644 834 aa17.76■□□□□ 0.43
CDPF1-203ENST00000404583 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
CDPF1-203ENST00000404583 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
CDPF1-203ENST00000404583 OTUD7AQ8TE49 926 aaPredicted RBP17.76■□□□□ 0.43
CDPF1-203ENST00000404583 EDC3Q96F86 508 aaKnown RBP17.76■□□□□ 0.43
CDPF1-203ENST00000404583 ECHDC1Q9NTX5 307 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms