RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 TDRD7Q8NHU6 1098 aaKnown RBP22.61■■□□□ 1.21
HDAC11-204ENST00000404040 OPTNQ96CV9 577 aa22.61■■□□□ 1.21
HDAC11-204ENST00000404040 ELP3Q9H9T3 547 aa22.61■■□□□ 1.21
HDAC11-204ENST00000404040 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
HDAC11-204ENST00000404040 ZNF70Q9UC06 446 aaPredicted RBP22.61■■□□□ 1.21
HDAC11-204ENST00000404040 SERPINA10Q9UK55 444 aa22.61■■□□□ 1.21
HDAC11-204ENST00000404040 CAP1Q01518 475 aa22.6■■□□□ 1.21
HDAC11-204ENST00000404040 SP3Q02447 781 aa22.6■■□□□ 1.21
HDAC11-204ENST00000404040 EXOSC9Q06265 439 aaKnown RBP22.6■■□□□ 1.21
HDAC11-204ENST00000404040 CDAN1Q8IWY9 1227 aa22.6■■□□□ 1.21
HDAC11-204ENST00000404040 TEPSINQ96N21 525 aa22.6■■□□□ 1.21
HDAC11-204ENST00000404040 TTF2Q9UNY4 1162 aaKnown RBP22.6■■□□□ 1.21
HDAC11-204ENST00000404040 TRMT2AQ8IZ69 625 aaKnown RBP22.59■■□□□ 1.21
HDAC11-204ENST00000404040 MS4A4AQ96JQ5 239 aa22.59■■□□□ 1.21
HDAC11-204ENST00000404040 TDRD3Q9H7E2 651 aaKnown RBP22.59■■□□□ 1.21
HDAC11-204ENST00000404040 GYG1P46976 350 aa22.58■■□□□ 1.21
HDAC11-204ENST00000404040 UBE4AQ14139 1066 aa22.58■■□□□ 1.21
HDAC11-204ENST00000404040 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.58■■□□□ 1.21
HDAC11-204ENST00000404040 CDCA7LQ96GN5 454 aa22.58■■□□□ 1.21
HDAC11-204ENST00000404040 DZIP1LQ8IYY4 767 aaKnown RBP22.57■■□□□ 1.2
HDAC11-204ENST00000404040 CNKSR2Q8WXI2 1034 aa22.57■■□□□ 1.2
HDAC11-204ENST00000404040 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
HDAC11-204ENST00000404040 TRIOBPQ9H2D6 2365 aa22.56■■□□□ 1.2
HDAC11-204ENST00000404040 CT47B1P0C2W7 299 aaPredicted RBP22.56■■□□□ 1.2
HDAC11-204ENST00000404040 HIBADHP31937 336 aaKnown RBP22.56■■□□□ 1.2
HDAC11-204ENST00000404040 CRKP46108 304 aa22.56■■□□□ 1.2
HDAC11-204ENST00000404040 VGLL4Q14135 290 aa22.56■■□□□ 1.2
HDAC11-204ENST00000404040 HABP4Q5JVS0 413 aaKnown RBP22.56■■□□□ 1.2
HDAC11-204ENST00000404040 FAM84BQ96KN1 310 aaPredicted RBP22.56■■□□□ 1.2
HDAC11-204ENST00000404040 TMEM39BQ9GZU3 492 aa22.56■■□□□ 1.2
HDAC11-204ENST00000404040 AK9Q5TCS8 1911 aa22.55■■□□□ 1.2
HDAC11-204ENST00000404040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.55■■□□□ 1.24e-6■□□□□ 11.3
HDAC11-204ENST00000404040 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
HDAC11-204ENST00000404040 CCL15-CCL14A0A0B4J2E2 113 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 TCP10L2B9ZVM9 353 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 ALDH1L1O75891 902 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 EN2P19622 333 aaPredicted RBP22.54■■□□□ 1.2
HDAC11-204ENST00000404040 GTF2A2P52657 109 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 TAF1CQ15572 869 aaPredicted RBP22.54■■□□□ 1.2
HDAC11-204ENST00000404040 CCL15Q16663 113 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 ZNF333Q96JL9 665 aa22.54■■□□□ 1.2
HDAC11-204ENST00000404040 TNNI2P48788 182 aa22.53■■□□□ 1.2
HDAC11-204ENST00000404040 PUS3Q9BZE2 481 aaKnown RBP22.53■■□□□ 1.2
HDAC11-204ENST00000404040 CSADQ9Y600 493 aa22.53■■□□□ 1.2
HDAC11-204ENST00000404040 MAP3K9P80192 1104 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 FAM43AQ8N2R8 423 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 OTUD5Q96G74 571 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 KAZALD1Q96I82 304 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 SUCLG2Q96I99 432 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 ZFYVE28Q9HCC9 887 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 MROH5Q6ZUA9 1318 aa22.52■■□□□ 1.2
HDAC11-204ENST00000404040 ARHGEF6Q15052 776 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 GRIK5Q16478 980 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 SLC9C1Q4G0N8 1177 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 RIPOR2Q9Y4F9 1068 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 PTCH2Q9Y6C5 1203 aa22.51■■□□□ 1.19
HDAC11-204ENST00000404040 SPDYE5A6NIY4 337 aa22.5■■□□□ 1.19
HDAC11-204ENST00000404040 HDLBPQ00341 1268 aaKnown RBP22.5■■□□□ 1.19
HDAC11-204ENST00000404040 SLC4A10Q6U841 1118 aa22.5■■□□□ 1.19
HDAC11-204ENST00000404040 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
HDAC11-204ENST00000404040 TMEM106CQ9BVX2 250 aa22.5■■□□□ 1.19
HDAC11-204ENST00000404040 MGAMO43451 1857 aa22.49■■□□□ 1.19
HDAC11-204ENST00000404040 FBXO33Q7Z6M2 555 aa22.49■■□□□ 1.19
HDAC11-204ENST00000404040 VPS37DQ86XT2 251 aa22.49■■□□□ 1.19
HDAC11-204ENST00000404040 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
HDAC11-204ENST00000404040 IQSEC3Q9UPP2 1182 aaPredicted RBP22.49■■□□□ 1.19
HDAC11-204ENST00000404040 SNCAIPQ9Y6H5 919 aa22.49■■□□□ 1.19
HDAC11-204ENST00000404040 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
HDAC11-204ENST00000404040 CACNB3P54284 484 aa22.48■■□□□ 1.19
HDAC11-204ENST00000404040 CHAF1AQ13111 956 aaPredicted RBP22.48■■□□□ 1.19
HDAC11-204ENST00000404040 NBPF11Q86T75 865 aa22.48■■□□□ 1.19
HDAC11-204ENST00000404040 TEKT1Q969V4 418 aa22.48■■□□□ 1.19
HDAC11-204ENST00000404040 UTYO14607 1347 aa22.48■■□□□ 1.19
HDAC11-204ENST00000404040 RPAP1Q9BWH6 1393 aaPredicted RBP22.48■■□□□ 1.19
HDAC11-204ENST00000404040 DOCK2Q92608 1830 aa22.47■■□□□ 1.19
HDAC11-204ENST00000404040 RABL6Q3YEC7 729 aaPredicted RBP22.47■■□□□ 1.19
HDAC11-204ENST00000404040 ZCCHC17Q9NP64 241 aaKnown RBP22.47■■□□□ 1.19
HDAC11-204ENST00000404040 CETPP11597 493 aa22.46■■□□□ 1.19
HDAC11-204ENST00000404040 ERO1BQ86YB8 467 aa22.46■■□□□ 1.19
HDAC11-204ENST00000404040 VGLL2Q8N8G2 317 aa22.46■■□□□ 1.19
HDAC11-204ENST00000404040 ZDHHC15Q96MV8 337 aa22.46■■□□□ 1.19
HDAC11-204ENST00000404040 WRNIP1Q96S55 665 aa22.46■■□□□ 1.19
HDAC11-204ENST00000404040 BICC1Q9H694 974 aaKnown RBP22.46■■□□□ 1.19
HDAC11-204ENST00000404040 TLR2O60603 784 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 WDHD1O75717 1129 aaPredicted RBP22.45■■□□□ 1.18
HDAC11-204ENST00000404040 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 LRRC24Q50LG9 513 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 CAVIN4Q5BKX8 364 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 METTL24Q5JXM2 366 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 FAM83AQ86UY5 434 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 ARHGAP39Q9C0H5 1083 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 TMOD2Q9NZR1 351 aa22.45■■□□□ 1.18
HDAC11-204ENST00000404040 BTBD19C9JJ37 291 aa22.44■■□□□ 1.18
HDAC11-204ENST00000404040 MAST3O60307 1309 aa22.44■■□□□ 1.18
HDAC11-204ENST00000404040 FRAT2O75474 233 aaPredicted RBP22.44■■□□□ 1.18
HDAC11-204ENST00000404040 PTPRFP10586 1907 aa22.44■■□□□ 1.18
HDAC11-204ENST00000404040 FXR1P51114 621 aaKnown RBP eCLIP22.44■■□□□ 1.18
HDAC11-204ENST00000404040 LACTBP83111 547 aaPredicted RBP22.44■■□□□ 1.18
HDAC11-204ENST00000404040 SNAPC2Q13487 334 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms