RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HDAC5Q9UQL6 1122 aa19.17■□□□□ 0.66
TPM1-207ENST00000403994 BCAR3O75815 825 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 RASA3Q14644 834 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 MAP3K11Q16584 847 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 TDRD3Q9H7E2 651 aaKnown RBP19.16■□□□□ 0.66
TPM1-207ENST00000403994 PA2G4Q9UQ80 394 aaKnown RBP19.16■□□□□ 0.66
TPM1-207ENST00000403994 TNNQ9UQP3 1299 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 HTTP42858 3142 aa19.16■□□□□ 0.66
TPM1-207ENST00000403994 GNAI3P08754 354 aa19.15■□□□□ 0.66
TPM1-207ENST00000403994 MKRN3Q13064 507 aaKnown RBP19.15■□□□□ 0.66
TPM1-207ENST00000403994 NBPF12Q5TAG4 269 aaPredicted RBP19.15■□□□□ 0.66
TPM1-207ENST00000403994 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
TPM1-207ENST00000403994 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
TPM1-207ENST00000403994 HDLBPQ00341 1268 aaKnown RBP19.14■□□□□ 0.65
TPM1-207ENST00000403994 SUPT20HL1Q3ZLR7 823 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
TPM1-207ENST00000403994 TEKT1Q969V4 418 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 MCOLN1Q9GZU1 580 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 COPRSQ9NQ92 184 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 MAST3O60307 1309 aa19.14■□□□□ 0.65
TPM1-207ENST00000403994 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
TPM1-207ENST00000403994 PPP1R12BO60237 982 aaPredicted RBP19.13■□□□□ 0.65
TPM1-207ENST00000403994 MTX1Q13505 466 aa19.13■□□□□ 0.65
TPM1-207ENST00000403994 SPRYD7Q5W111 196 aa19.13■□□□□ 0.65
TPM1-207ENST00000403994 CDAN1Q8IWY9 1227 aa19.13■□□□□ 0.65
TPM1-207ENST00000403994 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
TPM1-207ENST00000403994 SUGT1Q9Y2Z0 365 aa19.13■□□□□ 0.65
TPM1-207ENST00000403994 TCP10L2B9ZVM9 353 aa19.12■□□□□ 0.65
TPM1-207ENST00000403994 SREBF2Q12772 1141 aa19.12■□□□□ 0.65
TPM1-207ENST00000403994 ZDHHC15Q96MV8 337 aa19.12■□□□□ 0.65
TPM1-207ENST00000403994 TEPSINQ96N21 525 aa19.12■□□□□ 0.65
TPM1-207ENST00000403994 SRGAP3O43295 1099 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 IREB2P48200 963 aaKnown RBP19.11■□□□□ 0.65
TPM1-207ENST00000403994 TM4SF4P48230 202 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 DGKZQ13574 1117 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 WDR66Q8TBY9 1149 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 TMEM39BQ9GZU3 492 aa19.11■□□□□ 0.65
TPM1-207ENST00000403994 UNCXA6NJT0 531 aa19.1■□□□□ 0.65
TPM1-207ENST00000403994 PHKA1P46020 1223 aa19.1■□□□□ 0.65
TPM1-207ENST00000403994 CACNB3P54284 484 aa19.1■□□□□ 0.65
TPM1-207ENST00000403994 WNK4Q96J92 1243 aa19.1■□□□□ 0.65
TPM1-207ENST00000403994 MYH2Q9UKX2 1941 aa19.1■□□□□ 0.65
TPM1-207ENST00000403994 RPAP1Q9BWH6 1393 aaPredicted RBP19.09■□□□□ 0.65
TPM1-207ENST00000403994 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
TPM1-207ENST00000403994 ZBTB48P10074 688 aaPredicted RBP19.09■□□□□ 0.65
TPM1-207ENST00000403994 ADORA1P30542 326 aa19.09■□□□□ 0.65
TPM1-207ENST00000403994 TNNI2P48788 182 aa19.09■□□□□ 0.65
TPM1-207ENST00000403994 APOBEC3HQ6NTF7 200 aaKnown RBP19.09■□□□□ 0.65
TPM1-207ENST00000403994 SLC10A4Q96EP9 437 aa19.09■□□□□ 0.65
TPM1-207ENST00000403994 MRIQ9BWK5 157 aa19.09■□□□□ 0.65
TPM1-207ENST00000403994 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
TPM1-207ENST00000403994 USP2O75604 605 aaPredicted RBP19.08■□□□□ 0.64
TPM1-207ENST00000403994 PRDX5P30044 214 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 HHIPL2Q6UWX4 724 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 TMEM57Q8N5G2 664 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.64
TPM1-207ENST00000403994 TMOD2Q9NZR1 351 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.64
TPM1-207ENST00000403994 DOCK2Q92608 1830 aa19.08■□□□□ 0.64
TPM1-207ENST00000403994 SALL1Q9NSC2 1324 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 SEMA3EO15041 775 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 GNAI2P04899 355 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 GJA5P36382 358 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 DIXDC1Q155Q3 683 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 ANKRD13AQ8IZ07 590 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 DAGLAQ9Y4D2 1042 aa19.07■□□□□ 0.64
TPM1-207ENST00000403994 MANSC4A6NHS7 340 aaPredicted RBP19.06■□□□□ 0.64
TPM1-207ENST00000403994 ZBTB22O15209 634 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 TFCP2Q12800 502 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 FKBP1CQ5VVH2 108 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 CCDC102BQ68D86 513 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 CFHR5Q9BXR6 569 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
TPM1-207ENST00000403994 PDS5AQ29RF7 1337 aaKnown RBP19.05■□□□□ 0.64
TPM1-207ENST00000403994 PNMA6EA0A0J9YXQ4 647 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 CCDC85CA6NKD9 419 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 RASGRF1Q13972 1273 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 FAM83AQ86UY5 434 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 ELP3Q9H9T3 547 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
TPM1-207ENST00000403994 MAST2Q6P0Q8 1798 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 CENPFP49454 3210 aa19.05■□□□□ 0.64
TPM1-207ENST00000403994 A0A1B0GUL7 405 aa19.04■□□□□ 0.64
TPM1-207ENST00000403994 LDHBP07195 334 aaKnown RBP19.04■□□□□ 0.64
TPM1-207ENST00000403994 VGLL4Q14135 290 aa19.04■□□□□ 0.64
TPM1-207ENST00000403994 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
TPM1-207ENST00000403994 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
TPM1-207ENST00000403994 CTU1Q7Z7A3 348 aaKnown RBP19.04■□□□□ 0.64
TPM1-207ENST00000403994 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
TPM1-207ENST00000403994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.04■□□□□ 0.64
TPM1-207ENST00000403994 ZNF296Q8WUU4 475 aaPredicted RBP19.04■□□□□ 0.64
TPM1-207ENST00000403994 AK9Q5TCS8 1911 aa19.04■□□□□ 0.64
TPM1-207ENST00000403994 IGF2BP3O00425 579 aaKnown RBP eCLIP19.03■□□□□ 0.64
TPM1-207ENST00000403994 TIMM10P62072 90 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms