RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ECEL1O95672 775 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 BMP6P22004 513 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 LIG3P49916 1009 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 NLRP12P59046 1061 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 PPP2R3AQ06190 1150 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 TTBK2Q6IQ55 1244 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 KCNK4Q9NYG8 393 aa8.07□□□□□ -1.12
HMGB3P19-201ENST00000403971 MINDY4BA8MYZ0 360 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 ADAM11O75078 769 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 NME2P22392 152 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 ARL4DP49703 201 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 INSM1Q01101 510 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 FOXD4L6Q3SYB3 417 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 FOXD4L3Q6VB84 417 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 USP48Q86UV5 1035 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 WNT8BQ93098 351 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 ZC3H12CQ9C0D7 883 aaKnown RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 SOX17Q9H6I2 414 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
HMGB3P19-201ENST00000403971 CTSBP07858 339 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 GBP2P32456 591 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 MPRIPQ6WCQ1 1025 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 NRSN2Q9GZP1 204 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 CBX8Q9HC52 389 aa8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
HMGB3P19-201ENST00000403971 ARNTP27540 789 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 SUZ12Q15022 739 aaKnown RBP8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 PDZD3Q86UT5 571 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 KLHL23Q8NBE8 558 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 PCDHB5Q9Y5E4 795 aa8.04□□□□□ -1.12
HMGB3P19-201ENST00000403971 TFE3P19532 575 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 MAOBP27338 520 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 RAC1P63000 192 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 FAM160A1Q05DH4 1040 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 POU4F3Q15319 338 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 PODNQ7Z5L7 613 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 UBASH3BQ8TF42 649 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 TMEM74Q96NL1 305 aa8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P19-201ENST00000403971 DLL1O00548 723 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 WISP1O95388 367 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 DLGAP3O95886 979 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 PF4P02776 101 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 TNNI2P48788 182 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 AP3B2Q13367 1082 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 RHOVQ96L33 236 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 TGIF2Q9GZN2 237 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 ADAMTS1Q9UHI8 967 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 SAMM50Q9Y512 469 aa8.02□□□□□ -1.13
HMGB3P19-201ENST00000403971 LOC100289279A0A1B0GTE1 492 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 CYP11A1P05108 521 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 RLBP1P12271 317 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 COL8A1P27658 744 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 ZNF252P-AS1Q0IIN9 211 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 SEPT6Q14141 434 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 GRIK4Q16099 956 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 LLGL2Q6P1M3 1020 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 KCNB2Q92953 911 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
HMGB3P19-201ENST00000403971 RPS26P62854 115 aaKnown RBP8□□□□□ -1.13
HMGB3P19-201ENST00000403971 CAMK2GQ13555 558 aaPredicted RBP8□□□□□ -1.13
HMGB3P19-201ENST00000403971 PWP1Q13610 501 aa8□□□□□ -1.13
HMGB3P19-201ENST00000403971 ZNF654Q8IZM8 581 aa8□□□□□ -1.13
HMGB3P19-201ENST00000403971 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
HMGB3P19-201ENST00000403971 CCDC86Q9H6F5 360 aaKnown RBP8□□□□□ -1.13
HMGB3P19-201ENST00000403971 CYP8B1Q9UNU6 501 aa8□□□□□ -1.13
HMGB3P19-201ENST00000403971 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 PIK3R2O00459 728 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 GARTP22102 1010 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 EIF4A3P38919 411 aaKnown RBP7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 PDE3AQ14432 1141 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 DUOXA2Q1HG44 320 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 FBXL19Q6PCT2 694 aa7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 JARID2Q92833 1246 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P19-201ENST00000403971 NOP53Q9NZM5 478 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms