RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 PTPN21Q16825 1174 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 DNAJC21Q5F1R6 531 aaKnown RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 AFAP1L1Q8TED9 768 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 DHX58Q96C10 678 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 RTEL1Q9NZ71 1219 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 RRP15Q9Y3B9 282 aaKnown RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 PAFAH1B1P43034 410 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 ODF2Q5BJF6 829 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 MEX3CQ5U5Q3 659 aaKnown RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 NAPGQ99747 312 aaPredicted RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 KCNQ3O43525 872 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 TUBB2AQ13885 445 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 CNGA4Q8IV77 575 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 TUBB2BQ9BVA1 445 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 PARD6BQ9BYG5 372 aa15.9■□□□□ 0.14
HMGA2-204ENST00000403681 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
HMGA2-204ENST00000403681 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CMA1P23946 247 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 ACTN2P35609 894 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 ZNF274Q96GC6 653 aaPredicted RBP15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CEBPAP49715 358 aaPredicted RBP15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CCZ1BP86790 482 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CCZ1P86791 482 aaPredicted RBP15.89■□□□□ 0.13
HMGA2-204ENST00000403681 MICALCLQ6ZW33 695 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 TRMT44Q8IYL2 757 aaKnown RBP15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CYP2C19P33261 490 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 MLKLQ8NB16 471 aa15.89■□□□□ 0.13
HMGA2-204ENST00000403681 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
HMGA2-204ENST00000403681 GYS2P54840 703 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 EXOC4Q96A65 974 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
HMGA2-204ENST00000403681 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
HMGA2-204ENST00000403681 RRAGBQ5VZM2 374 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 EHBP1Q8NDI1 1231 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
HMGA2-204ENST00000403681 MTMR7Q9Y216 660 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 SPAG1Q07617 926 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 MYO1CO00159 1063 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 GOLPH3LQ9H4A5 285 aa15.88■□□□□ 0.13
HMGA2-204ENST00000403681 GLI2P10070 1586 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 ADCY9O60503 1353 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 MYO1BO43795 1136 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 PDIA3P30101 505 aaKnown RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 LUC7LQ9NQ29 371 aaKnown RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 IKBKBO14920 756 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 POLR2DO15514 142 aaKnown RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 STX10O60499 249 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 CUTAO60888 179 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 TTF2Q9UNY4 1162 aaKnown RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 CCDC151A5D8V7 595 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 GTF2E1P29083 439 aaPredicted RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
HMGA2-204ENST00000403681 NYAP1Q6ZVC0 841 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
HMGA2-204ENST00000403681 G3V3G9 751 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 ADAM21Q9UKJ8 722 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 ABCC3O15438 1527 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 DNA2P51530 1060 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 DHX40Q8IX18 779 aaKnown RBP15.86■□□□□ 0.13
HMGA2-204ENST00000403681 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 ZBTB3Q9H5J0 574 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
HMGA2-204ENST00000403681 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 TANGO6Q9C0B7 1094 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
HMGA2-204ENST00000403681 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
HMGA2-204ENST00000403681 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
HMGA2-204ENST00000403681 KRT40Q6A162 431 aa15.86■□□□□ 0.13
HMGA2-204ENST00000403681 CC2D1AQ6P1N0 951 aaPredicted RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
HMGA2-204ENST00000403681 SRGAP1Q7Z6B7 1085 aa15.85■□□□□ 0.13
HMGA2-204ENST00000403681 HSF2BPO75031 334 aa15.85■□□□□ 0.13
HMGA2-204ENST00000403681 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 CALRP27797 417 aaKnown RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 CYLC1P35663 651 aaPredicted RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
HMGA2-204ENST00000403681 CCDC91Q7Z6B0 441 aa15.85■□□□□ 0.13
HMGA2-204ENST00000403681 KIAA1210Q9ULL0 1709 aa15.84■□□□□ 0.13
HMGA2-204ENST00000403681 MINDY4BA8MYZ0 360 aa15.84■□□□□ 0.13
HMGA2-204ENST00000403681 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
HMGA2-204ENST00000403681 EPS15P42566 896 aa15.84■□□□□ 0.13
HMGA2-204ENST00000403681 POSTNQ15063 836 aa15.84■□□□□ 0.13
HMGA2-204ENST00000403681 ARMCX5Q6P1M9 558 aa15.84■□□□□ 0.13
HMGA2-204ENST00000403681 OTUD6BQ8N6M0 293 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms