RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLC43A3Q8NBI5 491 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 ANKRD24Q8TF21 1146 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 GDF2Q9UK05 429 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P17-201ENST00000403495 FAM177BA6PVY3 158 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 GMPRP36959 345 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 CRKP46108 304 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 GJA8P48165 433 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 GSTM4Q03013 218 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 ARID5AQ03989 594 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 PTPN11Q06124 597 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 PPP2R3AQ06190 1150 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 PWP1Q13610 501 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 GNL2Q13823 731 aaKnown RBP6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 SF3A1Q15459 793 aaKnown RBP6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 LYPD4Q6UWN0 246 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 AGMOQ6ZNB7 445 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 IRF7Q92985 503 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 ZFYVE1Q9HBF4 777 aa6.08□□□□□ -1.44
HMGB1P17-201ENST00000403495 H3BRJ5 948 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 F13A1P00488 732 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 CTSBP07858 339 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 ATF4P18848 351 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 NME2P22392 152 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 AMPD1P23109 780 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 CABP4P57796 275 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 BTBD6Q96KE9 485 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 GINM1Q9NU53 330 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 EFR3BQ9Y2G0 817 aa6.07□□□□□ -1.44
HMGB1P17-201ENST00000403495 DDX3YO15523 660 aaKnown RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 OIP5O43482 229 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 LILRB5O75023 590 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 FGRP09769 529 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 LMNB1P20700 586 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 ARNTP27540 789 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 CDK8P49336 464 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 LMNB2Q03252 620 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 MAP1SQ66K74 1059 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 TTC9Q92623 222 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 PPME1Q9Y570 386 aa6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 SUPT16HQ9Y5B9 1047 aaKnown RBP6.06□□□□□ -1.44
HMGB1P17-201ENST00000403495 GREM1O60565 184 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 CELA2BP08218 269 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 RLBP1P12271 317 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 NLRP12P59046 1061 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 APOBRQ0VD83 1088 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 SEZ6Q53EL9 994 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 KANK3Q6NY19 840 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 LLGL2Q6P1M3 1020 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 CCDC81Q6ZN84 652 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 WFDC8Q8IUA0 241 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 PMFBP1Q8TBY8 1022 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 UBXN4Q92575 508 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 KCNB2Q92953 911 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 GAL3ST3Q96A11 431 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 GMLQ99445 158 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 MIR1-1HGQ9H1L0 117 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 MRVI1Q9Y6F6 885 aa6.05□□□□□ -1.44
HMGB1P17-201ENST00000403495 FSCN2O14926 492 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 GSTP1P09211 210 aaKnown RBP6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 SLURP2P0DP57 97 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 BCRP11274 1271 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 COL9A3Q14050 684 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 MSL1Q68DK7 614 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 VPS37DQ86XT2 251 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 TRIM42Q8IWZ5 723 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 GALNT11Q8NCW6 608 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 NT5C1AQ9BXI3 368 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 USP26Q9BXU7 913 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 KCNQ5Q9NR82 932 aa6.04□□□□□ -1.44
HMGB1P17-201ENST00000403495 ADAM11O75078 769 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 SELPP16109 830 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 MAOBP27338 520 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 RPS26P62854 115 aaKnown RBP6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 C19orf57Q0VDD7 668 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 FAM196AQ6ZSG2 479 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 GPBAR1Q8TDU6 330 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 NKD1Q969G9 470 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 CCDC86Q9H6F5 360 aaKnown RBP6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 RRAGCQ9HB90 399 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 PPT2Q9UMR5 302 aa6.03□□□□□ -1.44
HMGB1P17-201ENST00000403495 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 FAM221AA4D161 298 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 GRIN3BO60391 1043 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 DEAF1O75398 565 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 WFS1O76024 890 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 DLGAP3O95886 979 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 NID1P14543 1247 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 HOXB4P17483 251 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms