RNA–Protein interactions for RNA: ENST00000402541.5

HS1BP3-202, Transcript of HCLS1 binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene HS1BP3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3-202ENST00000402541 PLS1Q14651 629 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 GNG11P61952 73 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 ASIC1P78348 528 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 PYM1Q9BRP8 204 aaKnown RBP12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 CHL1O00533 1208 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 AK2P54819 239 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 UBASH3AP57075 661 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
HS1BP3-202ENST00000402541 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 DHX58Q96C10 678 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 BMP15O95972 392 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 ATP7BP35670 1465 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 TRAF1Q13077 416 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 CPS1P31327 1500 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 CALM1P0DP23 149 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 CALM2P0DP24 149 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 CALM3P0DP25 149 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
HS1BP3-202ENST00000402541 SPTLC2O15270 562 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 CAVIN2O95810 425 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 SP4Q02446 784 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 ZSCAN23Q3MJ62 389 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 FAM114A1Q8IWE2 563 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 CERKQ8TCT0 537 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 C6orf50Q9HD87 102 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 SPDYE3A6NKU9 549 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 MBD4O95243 580 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 PTGS1P23219 599 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 DHX32Q7L7V1 743 aaKnown RBP12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 OTUD7AQ8TE49 926 aaPredicted RBP12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
HS1BP3-202ENST00000402541 NEMFO60524 1076 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 F13A1P00488 732 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 CHMLP26374 656 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 CNBD1Q8NA66 436 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 VTI1AQ96AJ9 217 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 DNAJC25Q9H1X3 360 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.34
HS1BP3-202ENST00000402541 PSMA7O14818 248 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 PLCG2P16885 1265 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 POLR1AO95602 1720 aaPredicted RBP12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 EYA2O00167 538 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 ALS2CR12Q96Q35 445 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 USP6P35125 1406 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 PRDM1O75626 825 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 SNW1Q13573 536 aaKnown RBP12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 IPO4Q8TEX9 1081 aaKnown RBP12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 PTPDC1A2A3K4 754 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 GNAT2P19087 354 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 ITGA6P23229 1130 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 POLD1P28340 1107 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 STX17P56962 302 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 DRC1Q96MC2 740 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 PLIN2Q99541 437 aa12.95□□□□□ -0.34
HS1BP3-202ENST00000402541 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 POLR3GO15318 223 aaPredicted RBP12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 PHACTR2O75167 634 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 CALML3P27482 149 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 ARID5AQ03989 594 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 CCDC186Q7Z3E2 898 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 RMND1Q9NWS8 449 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 KRT79Q5XKE5 535 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 NRXN3Q9Y4C0 1643 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 DTNBO60941 627 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 NBPF14Q5TI25 921 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 CCDC129Q6ZRS4 1044 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 AOPEPQ8N6M6 819 aa12.94□□□□□ -0.34
HS1BP3-202ENST00000402541 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
HS1BP3-202ENST00000402541 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
HS1BP3-202ENST00000402541 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
HS1BP3-202ENST00000402541 FAM200AQ8TCP9 573 aa12.93□□□□□ -0.34
HS1BP3-202ENST00000402541 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
HS1BP3-202ENST00000402541 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms