RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PHACTR2O75167 634 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 ZAP70P43403 619 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 HNRNPH2P55795 449 aaKnown RBP10.57□□□□□ -0.72
HPS4-203ENST00000402105 SLC26A6Q9BXS9 759 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 SLC52A2Q9HAB3 445 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
HPS4-203ENST00000402105 TECPR2O15040 1411 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 MON2Q7Z3U7 1717 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 B4E1Z4 1266 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 LMAN1P49257 510 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
HPS4-203ENST00000402105 EXOSC10Q01780 885 aaKnown RBP10.57□□□□□ -0.72
HPS4-203ENST00000402105 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
HPS4-203ENST00000402105 PLEKHG1Q9ULL1 1385 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 GPTP24298 496 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
HPS4-203ENST00000402105 MYL5Q02045 173 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 NCOA7Q8NI08 942 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 HELLSQ9NRZ9 838 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 RICTORQ6R327 1708 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 AFMP43652 599 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 ST5P78524 1137 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 SCARF1Q14162 830 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 LONRF3Q496Y0 759 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
HPS4-203ENST00000402105 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 IMPACTQ9P2X3 320 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 KCNJ14Q9UNX9 436 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 PCDHA5Q9Y5H7 936 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 OAS2P29728 719 aaKnown RBP10.56□□□□□ -0.72
HPS4-203ENST00000402105 ZMYM1Q5SVZ6 1142 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 STAMQ92783 540 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 ZNF274Q96GC6 653 aaPredicted RBP10.56□□□□□ -0.72
HPS4-203ENST00000402105 WDR24Q96S15 920 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 ALDH8A1Q9H2A2 487 aaPredicted RBP10.56□□□□□ -0.72
HPS4-203ENST00000402105 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 PXDNQ92626 1479 aa10.56□□□□□ -0.72
HPS4-203ENST00000402105 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 CCDC102BQ68D86 513 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 KRT40Q6A162 431 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 BAG1Q99933 345 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 DSCC1Q9BVC3 393 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 OSBPL5Q9H0X9 879 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 hCG_1642624A0A1W2PR95 340 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 CBFA2T2O43439 604 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 SLC9C2Q5TAH2 1124 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 TAF3Q5VWG9 929 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 FHOD1Q9Y613 1164 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 GPAA1O43292 621 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 ZSCAN12O43309 604 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 RHOXF2BP0C7M4 288 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 KIF23Q02241 960 aaPredicted RBP10.55□□□□□ -0.72
HPS4-203ENST00000402105 MTF1Q14872 753 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 ARHGEF25Q86VW2 580 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 RHOXF2Q9BQY4 288 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 TRIM34Q9BYJ4 488 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 PPP2R2CQ9Y2T4 447 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 NFE2L3Q9Y4A8 694 aa10.55□□□□□ -0.72
HPS4-203ENST00000402105 EYA2O00167 538 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
HPS4-203ENST00000402105 CASP1P29466 404 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 KCNH3Q9ULD8 1083 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 NRXN3Q9Y4C0 1643 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 IL15P40933 162 aaPredicted RBP10.54□□□□□ -0.72
HPS4-203ENST00000402105 NCAPHQ15003 741 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 METTL24Q5JXM2 366 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 JMYQ8N9B5 988 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 TFRCP02786 760 aaKnown RBP10.54□□□□□ -0.72
HPS4-203ENST00000402105 PDE4BQ07343 736 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
HPS4-203ENST00000402105 SHC4Q6S5L8 630 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 ATG9AQ7Z3C6 839 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 C10orf67Q8IYJ2 551 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 CNNM1Q9NRU3 951 aa10.54□□□□□ -0.72
HPS4-203ENST00000402105 ERBB3P21860 1342 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
HPS4-203ENST00000402105 YEATS4O95619 227 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 CMA1P23946 247 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 TMEM67Q5HYA8 995 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms