RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ALDH1L1O75891 902 aa15.08■□□□□ 0
LINC00544-201ENST00000400540 HIBADHP31937 336 aaKnown RBP15.08■□□□□ 0
LINC00544-201ENST00000400540 UBE4AQ14139 1066 aa15.08■□□□□ 0
LINC00544-201ENST00000400540 OPTNQ96CV9 577 aa15.08■□□□□ 0
LINC00544-201ENST00000400540 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
LINC00544-201ENST00000400540 SERPINA10Q9UK55 444 aa15.08■□□□□ 0
LINC00544-201ENST00000400540 CRKP46108 304 aa15.07■□□□□ 0
LINC00544-201ENST00000400540 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.07■□□□□ 0
LINC00544-201ENST00000400540 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
LINC00544-201ENST00000400540 RIPOR2Q9Y4F9 1068 aa15.07■□□□□ 0
LINC00544-201ENST00000400540 TESPA1A2RU30 521 aaPredicted RBP15.06■□□□□ 0
LINC00544-201ENST00000400540 CACNB3P54284 484 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 CHAF1AQ13111 956 aaPredicted RBP15.06■□□□□ 0
LINC00544-201ENST00000400540 TNFAIP1Q13829 316 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 VGLL4Q14135 290 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 LRRC24Q50LG9 513 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 ERO1AQ96HE7 468 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 BICC1Q9H694 974 aaKnown RBP15.06■□□□□ 0
LINC00544-201ENST00000400540 PTPN22Q9Y2R2 807 aa15.06■□□□□ 0
LINC00544-201ENST00000400540 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
LINC00544-201ENST00000400540 ANP32CO43423 234 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 OTUD7BQ6GQQ9 843 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 ANKRD44Q8N8A2 993 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 BRI3BPQ8WY22 251 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 UTYO14607 1347 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
LINC00544-201ENST00000400540 DOCK2Q92608 1830 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 SP3Q02447 781 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 RABL6Q3YEC7 729 aaPredicted RBP15.04■□□□□ -0
LINC00544-201ENST00000400540 FBXO33Q7Z6M2 555 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00544-201ENST00000400540 KLHDC4Q8TBB5 520 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 EFCC1Q9HA90 598 aa15.04■□□□□ -0
LINC00544-201ENST00000400540 CCL15-CCL14A0A0B4J2E2 113 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 CCL15Q16663 113 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 METTL24Q5JXM2 366 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 VPS37DQ86XT2 251 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 OTUD5Q96G74 571 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 MGAMO43451 1857 aa15.03■□□□□ -0
LINC00544-201ENST00000400540 TNNI2P48788 182 aa15.02■□□□□ -0
LINC00544-201ENST00000400540 MAP3K9P80192 1104 aa15.02■□□□□ -0
LINC00544-201ENST00000400540 TAF1CQ15572 869 aaPredicted RBP15.02■□□□□ -0
LINC00544-201ENST00000400540 INTS3Q68E01 1043 aaKnown RBP15.02■□□□□ -0
LINC00544-201ENST00000400540 FAM43AQ8N2R8 423 aa15.02■□□□□ -0
LINC00544-201ENST00000400540 MRPL50Q8N5N7 158 aaKnown RBP15.02■□□□□ -0
LINC00544-201ENST00000400540 ARMC5Q96C12 935 aa15.02■□□□□ -0
LINC00544-201ENST00000400540 MYH2Q9UKX2 1941 aa15.02□□□□□ -0.01
LINC00544-201ENST00000400540 ZNF521Q96K83 1311 aa15.01□□□□□ -0.01
LINC00544-201ENST00000400540 FRAT2O75474 233 aaPredicted RBP15.01□□□□□ -0.01
LINC00544-201ENST00000400540 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
LINC00544-201ENST00000400540 BCAMP50895 628 aa15.01□□□□□ -0.01
LINC00544-201ENST00000400540 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
LINC00544-201ENST00000400540 CSADQ9Y600 493 aa15.01□□□□□ -0.01
LINC00544-201ENST00000400540 SNCAIPQ9Y6H5 919 aa15.01□□□□□ -0.01
LINC00544-201ENST00000400540 PDE8BO95263 885 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 GTF2A2P52657 109 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 CAVIN4Q5BKX8 364 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 TBC1D22AQ8WUA7 517 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 ZKSCAN4Q969J2 545 aaPredicted RBP15□□□□□ -0.01
LINC00544-201ENST00000400540 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 PTPRFP10586 1907 aa15□□□□□ -0.01
LINC00544-201ENST00000400540 SPDYE5A6NIY4 337 aa14.99□□□□□ -0.01
LINC00544-201ENST00000400540 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
LINC00544-201ENST00000400540 APOBEC3HQ6NTF7 200 aaKnown RBP14.99□□□□□ -0.01
LINC00544-201ENST00000400540 ZDHHC15Q96MV8 337 aa14.99□□□□□ -0.01
LINC00544-201ENST00000400540 WRNIP1Q96S55 665 aa14.99□□□□□ -0.01
LINC00544-201ENST00000400540 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
LINC00544-201ENST00000400540 ZFYVE28Q9HCC9 887 aa14.99□□□□□ -0.01
LINC00544-201ENST00000400540 FGFR2P21802 821 aa14.98□□□□□ -0.01
LINC00544-201ENST00000400540 ZNF333Q96JL9 665 aa14.98□□□□□ -0.01
LINC00544-201ENST00000400540 PHIPQ8WWQ0 1821 aa14.98□□□□□ -0.01
LINC00544-201ENST00000400540 RPAP1Q9BWH6 1393 aaPredicted RBP14.98□□□□□ -0.01
LINC00544-201ENST00000400540 BTBD19C9JJ37 291 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 IRF6O14896 467 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
LINC00544-201ENST00000400540 MYCP01106 439 aaPredicted RBP14.97□□□□□ -0.01
LINC00544-201ENST00000400540 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
LINC00544-201ENST00000400540 FAM83AQ86UY5 434 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 TMOD2Q9NZR1 351 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 SZT2Q5T011 3432 aa14.97□□□□□ -0.01
LINC00544-201ENST00000400540 PTPRCP08575 1304 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 RFX5P48382 616 aaPredicted RBP14.96□□□□□ -0.01
LINC00544-201ENST00000400540 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 SLC9C1Q4G0N8 1177 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 ERO1BQ86YB8 467 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 SSH1Q8WYL5 1049 aa14.96□□□□□ -0.01
LINC00544-201ENST00000400540 MAST3O60307 1309 aa14.95□□□□□ -0.02
LINC00544-201ENST00000400540 KIF16BQ96L93 1317 aa14.95□□□□□ -0.02
LINC00544-201ENST00000400540 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
LINC00544-201ENST00000400540 TLR2O60603 784 aa14.95□□□□□ -0.02
LINC00544-201ENST00000400540 IFIT1P09914 478 aaKnown RBP14.95□□□□□ -0.02
LINC00544-201ENST00000400540 CETPP11597 493 aa14.95□□□□□ -0.02
LINC00544-201ENST00000400540 INPP5BP32019 993 aa14.95□□□□□ -0.02
LINC00544-201ENST00000400540 PPIL2Q13356 520 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms