RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
PTPRA-205ENST00000399903 SLC3A2P08195 630 aaKnown RBP19.7■□□□□ 0.74
PTPRA-205ENST00000399903 MRPS27Q92552 414 aaKnown RBP19.7■□□□□ 0.74
PTPRA-205ENST00000399903 ZNF396Q96N95 335 aaPredicted RBP19.7■□□□□ 0.74
PTPRA-205ENST00000399903 PTPDC1A2A3K4 754 aa19.7■□□□□ 0.74
PTPRA-205ENST00000399903 FOXR1Q6PIV2 292 aa19.7■□□□□ 0.74
PTPRA-205ENST00000399903 IMPACTQ9P2X3 320 aa19.7■□□□□ 0.74
PTPRA-205ENST00000399903 EFCAB8A8MWE9 144 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 PDE11AQ9HCR9 933 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 PCDHA7Q9UN72 937 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 LOC102724159A0A0B4J2E5 919 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 PWP2Q15269 919 aaKnown RBP19.69■□□□□ 0.74
PTPRA-205ENST00000399903 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 CCDC102AQ96A19 550 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 WDR24Q96S15 920 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 DESI2Q9BSY9 194 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 H3BQF6 201 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 DPF2Q92785 391 aa19.69■□□□□ 0.74
PTPRA-205ENST00000399903 FANCGO15287 622 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 TOP1P11387 765 aaKnown RBP19.68■□□□□ 0.74
PTPRA-205ENST00000399903 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 SRLQ86TD4 932 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 SART3Q15020 963 aaKnown RBP19.68■□□□□ 0.74
PTPRA-205ENST00000399903 RCOR1Q9UKL0 485 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 CCDC12Q8WUD4 166 aaPredicted RBP19.68■□□□□ 0.74
PTPRA-205ENST00000399903 KIAA1468Q9P260 1216 aa19.68■□□□□ 0.74
PTPRA-205ENST00000399903 TFCP2Q12800 502 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 E2F4Q16254 413 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 LMBR1LQ6UX01 489 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 FBXO18Q8NFZ0 1043 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 ALS2Q96Q42 1657 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 TMEM232C9JQI7 657 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 MTX1Q13505 466 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 LONRF2Q1L5Z9 754 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 MUM1L1Q5H9M0 696 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 ERC1Q8IUD2 1116 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 GOLGA5Q8TBA6 731 aa19.67■□□□□ 0.74
PTPRA-205ENST00000399903 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
PTPRA-205ENST00000399903 MARCKSP29966 332 aaPredicted RBP19.66■□□□□ 0.74
PTPRA-205ENST00000399903 NOM1Q5C9Z4 860 aaKnown RBP19.66■□□□□ 0.74
PTPRA-205ENST00000399903 REXO1L1PQ8IX06 675 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 SUGCTQ9HAC7 445 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 WDR17Q8IZU2 1322 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 TPM1P09493 284 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 EFCC1Q9HA90 598 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 HIP1O00291 1037 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 CCP110O43303 1012 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 N4BP1O75113 896 aaKnown RBP19.66■□□□□ 0.74
PTPRA-205ENST00000399903 TRIM65Q6PJ69 517 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 IRX2Q9BZI1 471 aaPredicted RBP19.66■□□□□ 0.74
PTPRA-205ENST00000399903 GJB4Q9NTQ9 266 aa19.66■□□□□ 0.74
PTPRA-205ENST00000399903 ACTN2P35609 894 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 TTC31Q49AM3 519 aaPredicted RBP19.65■□□□□ 0.74
PTPRA-205ENST00000399903 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
PTPRA-205ENST00000399903 PHLPP2Q6ZVD8 1323 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 IL2RBP14784 551 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 ADD1P35611 737 aaKnown RBP19.65■□□□□ 0.74
PTPRA-205ENST00000399903 DHX58Q96C10 678 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 SRRTQ9BXP5 876 aaKnown RBP19.65■□□□□ 0.74
PTPRA-205ENST00000399903 LZTFL1Q9NQ48 299 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 BTG4Q9NY30 223 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.65■□□□□ 0.744e-7■■□□□ 13.3
PTPRA-205ENST00000399903 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
PTPRA-205ENST00000399903 RHOXF2BP0C7M4 288 aa19.64■□□□□ 0.74
PTPRA-205ENST00000399903 ADKP55263 362 aaKnown RBP19.64■□□□□ 0.74
PTPRA-205ENST00000399903 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.74
PTPRA-205ENST00000399903 RHOXF2Q9BQY4 288 aa19.64■□□□□ 0.74
PTPRA-205ENST00000399903 ASAP1Q9ULH1 1129 aa19.64■□□□□ 0.74
PTPRA-205ENST00000399903 CLIC4Q9Y696 253 aa19.64■□□□□ 0.74
PTPRA-205ENST00000399903 ZSCAN12O43309 604 aa19.64■□□□□ 0.73
PTPRA-205ENST00000399903 ENGASEQ8NFI3 743 aa19.64■□□□□ 0.73
PTPRA-205ENST00000399903 PPP2R2CQ9Y2T4 447 aa19.64■□□□□ 0.73
PTPRA-205ENST00000399903 NOP2P46087 812 aaKnown RBP19.64■□□□□ 0.73
PTPRA-205ENST00000399903 GPR161Q8N6U8 529 aaKnown RBP19.64■□□□□ 0.73
PTPRA-205ENST00000399903 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
PTPRA-205ENST00000399903 ICE2Q659A1 982 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 FAN1Q9Y2M0 1017 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
PTPRA-205ENST00000399903 RGS22Q8NE09 1264 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 DBNDD2Q9BQY9 259 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 FUT8Q9BYC5 575 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 NSUN7Q8NE18 718 aaKnown RBP19.63■□□□□ 0.73
PTPRA-205ENST00000399903 GOLGA1Q92805 767 aa19.63■□□□□ 0.73
PTPRA-205ENST00000399903 TAF5LO75529 589 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 PTPN12Q05209 780 aaKnown RBP19.62■□□□□ 0.73
PTPRA-205ENST00000399903 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
PTPRA-205ENST00000399903 FMR1NBQ8N0W7 255 aaPredicted RBP19.62■□□□□ 0.73
PTPRA-205ENST00000399903 SYNE4Q8N205 404 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 CPLX3Q8WVH0 158 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 KCNB2Q92953 911 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 JAKMIP3Q5VZ66 844 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 RABEP2Q9H5N1 569 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 DBNLQ9UJU6 430 aaKnown RBP19.62■□□□□ 0.73
PTPRA-205ENST00000399903 JRKLQ9Y4A0 524 aa19.62■□□□□ 0.73
PTPRA-205ENST00000399903 C5P01031 1676 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 ZNF202O95125 648 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 CYP21A2P08686 494 aa19.61■□□□□ 0.73
PTPRA-205ENST00000399903 TIMM10P62072 90 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms