RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 ANKRD2Q9GZV1 360 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 ARMT1Q9H993 441 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 STK3Q13188 491 aa17.96■□□□□ 0.47
COL25A1-201ENST00000399126 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
COL25A1-201ENST00000399126 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
COL25A1-201ENST00000399126 DENND2AQ9ULE3 1009 aa17.96■□□□□ 0.47
COL25A1-201ENST00000399126 PNPLA7Q6ZV29 1317 aa17.96■□□□□ 0.47
COL25A1-201ENST00000399126 IRS2Q9Y4H2 1338 aa17.96■□□□□ 0.47
COL25A1-201ENST00000399126 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
COL25A1-201ENST00000399126 APPP05067 770 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 NBPF3Q9H094 633 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 PRKAB2O43741 272 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 EN1Q05925 392 aaPredicted RBP17.95■□□□□ 0.46
COL25A1-201ENST00000399126 LCORLQ8N3X6 602 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 ZNF384Q8TF68 577 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
COL25A1-201ENST00000399126 HIBADHP31937 336 aaKnown RBP17.95■□□□□ 0.46
COL25A1-201ENST00000399126 EZH2Q15910 746 aaKnown RBP17.95■□□□□ 0.46
COL25A1-201ENST00000399126 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
COL25A1-201ENST00000399126 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
COL25A1-201ENST00000399126 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
COL25A1-201ENST00000399126 CERS3Q8IU89 383 aa17.94■□□□□ 0.46
COL25A1-201ENST00000399126 BRF1Q92994 677 aa17.94■□□□□ 0.46
COL25A1-201ENST00000399126 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-201ENST00000399126 GPSM2P81274 684 aa17.94■□□□□ 0.46
COL25A1-201ENST00000399126 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-201ENST00000399126 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-201ENST00000399126 GBP4Q96PP9 640 aa17.94■□□□□ 0.46
COL25A1-201ENST00000399126 SH2B1Q9NRF2 756 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-201ENST00000399126 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
COL25A1-201ENST00000399126 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
COL25A1-201ENST00000399126 CTNNA3Q9UI47 895 aa17.93■□□□□ 0.46
COL25A1-201ENST00000399126 MMP10P09238 476 aa17.93■□□□□ 0.46
COL25A1-201ENST00000399126 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
COL25A1-201ENST00000399126 NSFL1CQ9UNZ2 370 aaKnown RBP17.93■□□□□ 0.46
COL25A1-201ENST00000399126 BRD1O95696 1058 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 CYP7A1P22680 504 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
COL25A1-201ENST00000399126 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 INCENPQ9NQS7 918 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 ZNF213O14771 459 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 GJB2P29033 226 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
COL25A1-201ENST00000399126 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
COL25A1-201ENST00000399126 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
COL25A1-201ENST00000399126 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
COL25A1-201ENST00000399126 XDHP47989 1333 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
COL25A1-201ENST00000399126 GSG1L2A8MUP6 293 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 PRDX5P30044 214 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 OLFM4Q6UX06 510 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 KCNG1Q9UIX4 513 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 PRDM4Q9UKN5 801 aa17.91■□□□□ 0.46
COL25A1-201ENST00000399126 NRXN2Q9P2S2 1712 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 MCTP1Q6DN14 999 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 IFNL3Q8IZI9 196 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
COL25A1-201ENST00000399126 DDX11L8A8MPP1 907 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 CLSTN1O94985 981 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 SYT1P21579 422 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 TCHHQ07283 1943 aa17.9■□□□□ 0.46
COL25A1-201ENST00000399126 PATL2C9JE40 543 aaKnown RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 UFL1O94874 794 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 DYNLL1P63167 89 aaKnown RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 SDR42E1Q8WUS8 393 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 TACC3Q9Y6A5 838 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 SLC4A4Q9Y6R1 1079 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 COL11A2P13942 1736 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 SMIM22K7EJ46 135 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 TRAK2O60296 914 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 CHRM1P11229 460 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 ANTXR2P58335 489 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 MB21D2Q8IYB1 491 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-201ENST00000399126 LEMD3Q9Y2U8 911 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 CHD4Q14839 1912 aa17.89■□□□□ 0.45
COL25A1-201ENST00000399126 CTDSPL2Q05D32 466 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 STK11IPQ8N1F8 1099 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 FBXO41Q8TF61 875 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 BAZ2AQ9UIF9 1905 aaKnown RBP17.88■□□□□ 0.45
COL25A1-201ENST00000399126 JAK2O60674 1132 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 MECOMQ03112 1051 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
COL25A1-201ENST00000399126 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
COL25A1-201ENST00000399126 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
COL25A1-201ENST00000399126 POLLQ9UGP5 575 aa17.88■□□□□ 0.45
COL25A1-201ENST00000399126 SEMA3EO15041 775 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 PPFIA3O75145 1194 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 SCRN1Q12765 414 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms