RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 KCNG4Q8TDN1 519 aa13.28□□□□□ -0.28
C4orf3-201ENST00000399075 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
C4orf3-201ENST00000399075 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
C4orf3-201ENST00000399075 NUP98P52948 1817 aa13.27□□□□□ -0.28
C4orf3-201ENST00000399075 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.28
C4orf3-201ENST00000399075 HAND2P61296 217 aa13.27□□□□□ -0.28
C4orf3-201ENST00000399075 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.28
C4orf3-201ENST00000399075 GREM2Q9H772 168 aa13.27□□□□□ -0.28
C4orf3-201ENST00000399075 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.28
C4orf3-201ENST00000399075 FAM13BQ9NYF5 915 aa13.27□□□□□ -0.28
C4orf3-201ENST00000399075 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 CYP19A1P11511 503 aaPredicted RBP13.27□□□□□ -0.29
C4orf3-201ENST00000399075 HLFQ16534 295 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 LINC00301Q8NCQ3 95 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 PCDHA7Q9UN72 937 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
C4orf3-201ENST00000399075 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.29
C4orf3-201ENST00000399075 ARID4AP29374 1257 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 C11orf57Q6ZUT1 292 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 AK7Q96M32 723 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 UQCRFS1P1P0C7P4 283 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 PI16Q6UXB8 463 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 DRC7Q8IY82 874 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 IRS4O14654 1257 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 CPLX1O14810 134 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 PDE8AO60658 829 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 PDE8BO95263 885 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 TRDNQ13061 729 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 CHAF1AQ13111 956 aaPredicted RBP13.26□□□□□ -0.29
C4orf3-201ENST00000399075 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 CNNM1Q9NRU3 951 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
C4orf3-201ENST00000399075 NEMFO60524 1076 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
C4orf3-201ENST00000399075 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
C4orf3-201ENST00000399075 DOCK2Q92608 1830 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 ALX1Q15699 326 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 SLC9C2Q5TAH2 1124 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 SYNE4Q8N205 404 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 WNK3Q9BYP7 1800 aa13.25□□□□□ -0.29
C4orf3-201ENST00000399075 CDKL5O76039 1030 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 GPTP24298 496 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 STK38Q15208 465 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 DHX40Q8IX18 779 aaKnown RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 PIH1D3Q9NQM4 214 aaKnown RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 ZBTB22O15209 634 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 KIF23Q02241 960 aaPredicted RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 BPIFA3Q9BQP9 254 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 TRMT112Q9UI30 125 aaKnown RBP13.24□□□□□ -0.29
C4orf3-201ENST00000399075 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 TIAM2Q8IVF5 1701 aa13.24□□□□□ -0.29
C4orf3-201ENST00000399075 SPTLC2O15270 562 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 FGFR2P21802 821 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 PUM3Q15397 648 aaKnown RBP13.23□□□□□ -0.29
C4orf3-201ENST00000399075 LPIN2Q92539 896 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 TMEM87BQ96K49 555 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
C4orf3-201ENST00000399075 TCRBV5S4A2TA0A5A2 114 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 BECN2A8MW95 431 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 PDE6AP16499 860 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 SF3A1Q15459 793 aaKnown RBP13.23□□□□□ -0.29
C4orf3-201ENST00000399075 CCDC102BQ68D86 513 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 TBC1D10CQ8IV04 446 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
C4orf3-201ENST00000399075 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
C4orf3-201ENST00000399075 NEDD4P46934 1319 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 NDUFA8P51970 172 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 LRMPQ12912 555 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 ECM29Q5VYK3 1845 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
C4orf3-201ENST00000399075 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
C4orf3-201ENST00000399075 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
C4orf3-201ENST00000399075 NID2Q14112 1375 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 KIF28PB7ZC32 967 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 IDH1O75874 414 aaKnown RBP13.21□□□□□ -0.29
C4orf3-201ENST00000399075 CMA1P23946 247 aa13.21□□□□□ -0.29
C4orf3-201ENST00000399075 PHKA1P46020 1223 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms