RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 EIF2B5Q13144 721 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 SYCP3Q8IZU3 236 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TRIM6Q9C030 488 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 CDK5RAP2Q96SN8 1893 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 BIN1O00499 593 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PRPF40AO75400 957 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 SNRPA1P09661 255 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 PRR29P0C7W0 189 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 DNAJC21Q5F1R6 531 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 EFCAB13Q8IY85 973 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 GPR161Q8N6U8 529 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 CNBD1Q8NA66 436 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 DYDC1Q8WWB3 177 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 ESR2Q92731 530 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD9-202ENST00000398510 BCAP29Q9UHQ4 241 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 KDM3AQ9Y4C1 1321 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PZPP20742 1482 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 FSD2A1L4K1 749 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 WASLO00401 505 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 TRIM37O94972 964 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PIP4K2BP78356 416 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8FQ08AF8 430 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8DPQ0D2H9 430 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TAF7Q15545 349 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 TWISTNBQ3B726 338 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 ELMOD1Q8N336 334 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 EVI5LQ96CN4 794 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TTC25Q96NG3 672 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 ARID3AQ99856 593 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 EXOC1Q9NV70 894 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 STK32BQ9NY57 414 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 IPO11Q9UI26 975 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 PPFIA3O75145 1194 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 KIAA1328Q86T90 577 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TEX2Q8IWB9 1127 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CCDC155Q8N6L0 562 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 ENGASEQ8NFI3 743 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 DCAF5Q96JK2 942 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 KAT14Q9H8E8 782 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 BPIFB4P59827 614 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CC2D2BQ6DHV5 1058 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 RSPH3Q86UC2 560 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 GIMAP8Q8ND71 665 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA5Q8TBA6 731 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 FAM200AQ8TCP9 573 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 DDX27Q96GQ7 796 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 PLCB1Q9NQ66 1216 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 FRMD4BQ9Y2L6 1034 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 POLR3AO14802 1390 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 FAM177BA6PVY3 158 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 RANBP1P43487 201 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 VWA3BQ502W6 1294 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 ARHGAP45Q92619 1136 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 VTI1AQ96AJ9 217 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 RRP36Q96EU6 259 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 TTC1Q99614 292 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PRKRIP1Q9H875 184 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 ADD3Q9UEY8 706 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 DAPK3O43293 454 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 HSPA8P11142 646 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 IL2RBP14784 551 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 EXOSC9Q06265 439 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 CCDC96Q2M329 555 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 MAP7D1Q3KQU3 841 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PREPLQ4J6C6 727 aaPredicted RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 RILPL1Q5EBL4 403 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 NIM1KQ8IY84 436 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CEP63Q96MT8 703 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PPP1R9BQ96SB3 815 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 VCXQ9H320 206 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TXNDC16Q9P2K2 825 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 GIPC1O14908 333 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 YEATS4O95619 227 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TSPY3P0CV98 308 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 TSPY8P0CW00 308 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 PDE4AP27815 886 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 HOXD10P28358 340 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 CIITAP33076 1130 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 EIF5P55010 431 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 IRX4P78413 519 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 BLOC1S2Q6QNY1 142 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 NUCKS1Q9H1E3 243 aaKnown RBP3.08□□□□□ -1.92
CHD9-202ENST00000398510 NPC1L1Q9UHC9 1359 aa3.08□□□□□ -1.92
CHD9-202ENST00000398510 ZNF233A6NK53 670 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 XPOTO43592 962 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 KRT13P13646 458 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CCDC15Q0P6D6 951 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 BIRC2Q13490 618 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 DDX54Q8TDD1 881 aaKnown RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 BICD1Q96G01 975 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 CDCA7LQ96GN5 454 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 TBC1D2Q9BYX2 928 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 MRGBPQ9NV56 204 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 BSDC1Q9NW68 430 aaPredicted RBP3.07□□□□□ -1.92
CHD9-202ENST00000398510 A0A1B0GVL5 298 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 GOLGA8JA6NMD2 632 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 TMCO5BA8MYB1 307 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 TMOD1P28289 359 aa3.07□□□□□ -1.92
CHD9-202ENST00000398510 PPFIA1Q13136 1202 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms