RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ANKRD44Q8N8A2 993 aa15.21■□□□□ 0.03
TFF3-202ENST00000398431 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
TFF3-202ENST00000398431 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
TFF3-202ENST00000398431 VGLL2Q8N8G2 317 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 BICC1Q9H694 974 aaKnown RBP15.2■□□□□ 0.02
TFF3-202ENST00000398431 ELP3Q9H9T3 547 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 IQSEC3Q9UPP2 1182 aaPredicted RBP15.2■□□□□ 0.02
TFF3-202ENST00000398431 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
TFF3-202ENST00000398431 MROH5Q6ZUA9 1318 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 TCP10L2B9ZVM9 353 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 CD99L2Q8TCZ2 262 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 OPTNQ96CV9 577 aa15.19■□□□□ 0.02
TFF3-202ENST00000398431 OTOFQ9HC10 1997 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 PDE8BO95263 885 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 MAP3K9P80192 1104 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 HDLBPQ00341 1268 aaKnown RBP15.18■□□□□ 0.02
TFF3-202ENST00000398431 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.18■□□□□ 0.02
TFF3-202ENST00000398431 BRI3BPQ8WY22 251 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 MRIQ9BWK5 157 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
TFF3-202ENST00000398431 BCAMP50895 628 aa15.17■□□□□ 0.02
TFF3-202ENST00000398431 SP3Q02447 781 aa15.17■□□□□ 0.02
TFF3-202ENST00000398431 VGLL4Q14135 290 aa15.17■□□□□ 0.02
TFF3-202ENST00000398431 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
TFF3-202ENST00000398431 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
TFF3-202ENST00000398431 FGFR2P21802 821 aa15.16■□□□□ 0.02
TFF3-202ENST00000398431 CACNB3P54284 484 aa15.16■□□□□ 0.02
TFF3-202ENST00000398431 CHAF1AQ13111 956 aaPredicted RBP15.16■□□□□ 0.02
TFF3-202ENST00000398431 METTL24Q5JXM2 366 aa15.16■□□□□ 0.02
TFF3-202ENST00000398431 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
TFF3-202ENST00000398431 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
TFF3-202ENST00000398431 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
TFF3-202ENST00000398431 ARAP2Q8WZ64 1704 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
TFF3-202ENST00000398431 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
TFF3-202ENST00000398431 TNNI2P48788 182 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 ARMC5Q96C12 935 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
TFF3-202ENST00000398431 HTTP42858 3142 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 GTF2A2P52657 109 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 CCL15Q16663 113 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 CAVIN4Q5BKX8 364 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 VPS37DQ86XT2 251 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 SNCAIPQ9Y6H5 919 aa15.14■□□□□ 0.01
TFF3-202ENST00000398431 SPDYE5A6NIY4 337 aa15.13■□□□□ 0.01
TFF3-202ENST00000398431 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
TFF3-202ENST00000398431 TEKT1Q969V4 418 aa15.13■□□□□ 0.01
TFF3-202ENST00000398431 OTUD5Q96G74 571 aa15.13■□□□□ 0.01
TFF3-202ENST00000398431 PTPRCP08575 1304 aa15.13■□□□□ 0.01
TFF3-202ENST00000398431 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
TFF3-202ENST00000398431 EN2P19622 333 aaPredicted RBP15.12■□□□□ 0.01
TFF3-202ENST00000398431 TAF1CQ15572 869 aaPredicted RBP15.12■□□□□ 0.01
TFF3-202ENST00000398431 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
TFF3-202ENST00000398431 HHIPL2Q6UWX4 724 aa15.12■□□□□ 0.01
TFF3-202ENST00000398431 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
TFF3-202ENST00000398431 ZFYVE28Q9HCC9 887 aa15.12■□□□□ 0.01
TFF3-202ENST00000398431 SUGT1Q9Y2Z0 365 aa15.12■□□□□ 0.01
TFF3-202ENST00000398431 CSADQ9Y600 493 aa15.12■□□□□ 0.01
TFF3-202ENST00000398431 EYA2O00167 538 aa15.11■□□□□ 0.01
TFF3-202ENST00000398431 IRF6O14896 467 aa15.11■□□□□ 0.01
TFF3-202ENST00000398431 ATG9AQ7Z3C6 839 aa15.11■□□□□ 0.01
TFF3-202ENST00000398431 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
TFF3-202ENST00000398431 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
TFF3-202ENST00000398431 BTBD19C9JJ37 291 aa15.1■□□□□ 0.01
TFF3-202ENST00000398431 IFIT1P09914 478 aaKnown RBP15.1■□□□□ 0.01
TFF3-202ENST00000398431 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
TFF3-202ENST00000398431 PUM3Q15397 648 aaKnown RBP15.1■□□□□ 0.01
TFF3-202ENST00000398431 ZNF333Q96JL9 665 aa15.1■□□□□ 0.01
TFF3-202ENST00000398431 PTCH2Q9Y6C5 1203 aa15.1■□□□□ 0.01
TFF3-202ENST00000398431 RBBP6Q7Z6E9 1792 aaKnown RBP15.1■□□□□ 0.01
TFF3-202ENST00000398431 TLR2O60603 784 aa15.09■□□□□ 0.01
TFF3-202ENST00000398431 MIGA2Q7L4E1 593 aa15.09■□□□□ 0.01
TFF3-202ENST00000398431 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
TFF3-202ENST00000398431 ARHGAP39Q9C0H5 1083 aa15.09■□□□□ 0.01
TFF3-202ENST00000398431 E9PSI1 815 aa15.08■□□□□ 0
TFF3-202ENST00000398431 CETPP11597 493 aa15.08■□□□□ 0
TFF3-202ENST00000398431 INPP5BP32019 993 aa15.08■□□□□ 0
TFF3-202ENST00000398431 WDR66Q8TBY9 1149 aa15.08■□□□□ 0
TFF3-202ENST00000398431 LPIN2Q92539 896 aa15.08■□□□□ 0
TFF3-202ENST00000398431 CDCA7LQ96GN5 454 aa15.08■□□□□ 0
TFF3-202ENST00000398431 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0
TFF3-202ENST00000398431 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
TFF3-202ENST00000398431 ZNF112Q9UJU3 913 aa15.08■□□□□ 0
TFF3-202ENST00000398431 PPIL2Q13356 520 aa15.07■□□□□ 0
TFF3-202ENST00000398431 CDC42EP5Q6NZY7 148 aa15.07■□□□□ 0
TFF3-202ENST00000398431 FAM151AQ8WW52 585 aa15.07■□□□□ 0
TFF3-202ENST00000398431 ZNF341Q9BYN7 854 aa15.07■□□□□ 0
TFF3-202ENST00000398431 DAGLAQ9Y4D2 1042 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms