RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FOXO4P98177 505 aa18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 SF3A1Q15459 793 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 ATL3Q6DD88 541 aa18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 FMR1NBQ8N0W7 255 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 ZNF594Q96JF6 807 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 NAT10Q9H0A0 1025 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 ARGLU1Q9NWB6 273 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 M0R2C6 588 aa18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 ZRANB2O95218 330 aaKnown RBP eCLIP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 CASQ1P31415 396 aa18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 RAB11FIP4Q86YS3 637 aa18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 SECISBP2LQ93073 1101 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 MYO1CO00159 1063 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 IFIT1P09914 478 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 HAND2P61296 217 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 STK38Q15208 465 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 DPCR1Q3MIW9 517 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 CLIC4Q9Y696 253 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 PCDH11XQ9BZA7 1347 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 PCDH11YQ9BZA8 1340 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 BIN1O00499 593 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 GTF2A1P52655 376 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 TOM1L2Q6ZVM7 507 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 NBPF11Q86T75 865 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 PLBD2Q8NHP8 589 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 ZCRB1Q8TBF4 217 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 ZBTB9Q96C00 473 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 ARFGEF2Q9Y6D5 1785 aa18.48■□□□□ 0.55
CHMP1A-201ENST00000397901 RNF113AO15541 343 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 SMC2O95347 1197 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 SHANK3Q9BYB0 1731 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 POLR3GO15318 223 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 ATP8B1O43520 1251 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 ADALQ6DHV7 355 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 GJB4Q9NTQ9 266 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 RTEL1Q9NZ71 1219 aa18.47■□□□□ 0.55
CHMP1A-201ENST00000397901 MMP14P50281 582 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 ZSCAN26Q16670 478 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 C10orf67Q8IYJ2 551 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 FKBP4Q02790 459 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 ARHGAP29Q52LW3 1261 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 LINC00301Q8NCQ3 95 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 IFNKQ9P0W0 207 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 TAOK2Q9UL54 1235 aa18.46■□□□□ 0.55
CHMP1A-201ENST00000397901 A0A1B0GUL7 405 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 CCDC93Q567U6 631 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 ICE2Q659A1 982 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 C8orf76Q96K31 380 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 XPO4Q9C0E2 1151 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 KIAA1468Q9P260 1216 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 PAPPAQ13219 1627 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 H7C1W4 665 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 GSDMDP57764 484 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 TTLL7Q6ZT98 887 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 SMARCE1Q969G3 411 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 CARD10Q9BWT7 1032 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 UBXN6Q9BZV1 441 aa18.45■□□□□ 0.54
CHMP1A-201ENST00000397901 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 A0A1W2PQ27 194 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 A0A1W2PQ64 194 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 A0A1W2PQD8 194 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 TUBB4AP04350 444 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHMP1A-201ENST00000397901 KLF18A0A0U1RQI7 1052 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 EYA2O00167 538 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 TRIM66O15016 1216 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 SPTLC2O15270 562 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 ST5P78524 1137 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 ISM2Q6H9L7 571 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 GOLGA6L1Q8N7Z2 621 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 OSBPL5Q9H0X9 879 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 BRMS1Q9HCU9 246 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 KCPQ6ZWJ8 1503 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 IL2RBP14784 551 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 E4F1Q66K89 784 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 ARMCX5Q6P1M9 558 aa18.43■□□□□ 0.54
CHMP1A-201ENST00000397901 GOLGA5Q8TBA6 731 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms