RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 PLIN1O60240 522 aa20.45■□□□□ 0.86
CUX2-202ENST00000397643 CCDC57Q2TAC2 916 aa20.45■□□□□ 0.86
CUX2-202ENST00000397643 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
CUX2-202ENST00000397643 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
CUX2-202ENST00000397643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.45■□□□□ 0.86
CUX2-202ENST00000397643 TMEM39BQ9GZU3 492 aa20.45■□□□□ 0.86
CUX2-202ENST00000397643 PTCH2Q9Y6C5 1203 aa20.45■□□□□ 0.86
CUX2-202ENST00000397643 ZSWIM8A7E2V4 1837 aa20.45■□□□□ 0.86
CUX2-202ENST00000397643 GRM8O00222 908 aa20.44■□□□□ 0.86
CUX2-202ENST00000397643 GYG1P46976 350 aa20.44■□□□□ 0.86
CUX2-202ENST00000397643 FXR1P51114 621 aaKnown RBP eCLIP20.44■□□□□ 0.86
CUX2-202ENST00000397643 GRIK5Q16478 980 aa20.44■□□□□ 0.86
CUX2-202ENST00000397643 FAM43AQ8N2R8 423 aa20.44■□□□□ 0.86
CUX2-202ENST00000397643 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
CUX2-202ENST00000397643 CNNM1Q9NRU3 951 aa20.44■□□□□ 0.86
CUX2-202ENST00000397643 CCL15-CCL14A0A0B4J2E2 113 aa20.43■□□□□ 0.86
CUX2-202ENST00000397643 TCP10L2B9ZVM9 353 aa20.43■□□□□ 0.86
CUX2-202ENST00000397643 UBE4AQ14139 1066 aa20.43■□□□□ 0.86
CUX2-202ENST00000397643 TAF1CQ15572 869 aaPredicted RBP20.43■□□□□ 0.86
CUX2-202ENST00000397643 CCL15Q16663 113 aa20.43■□□□□ 0.86
CUX2-202ENST00000397643 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
CUX2-202ENST00000397643 CRKP46108 304 aa20.42■□□□□ 0.86
CUX2-202ENST00000397643 MAP3K9P80192 1104 aa20.42■□□□□ 0.86
CUX2-202ENST00000397643 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
CUX2-202ENST00000397643 PUS3Q9BZE2 481 aaKnown RBP20.42■□□□□ 0.86
CUX2-202ENST00000397643 ZFYVE28Q9HCC9 887 aa20.42■□□□□ 0.86
CUX2-202ENST00000397643 TRIOBPQ9H2D6 2365 aa20.41■□□□□ 0.86
CUX2-202ENST00000397643 GTF2A2P52657 109 aa20.41■□□□□ 0.86
CUX2-202ENST00000397643 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
CUX2-202ENST00000397643 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
CUX2-202ENST00000397643 OTUD5Q96G74 571 aa20.41■□□□□ 0.86
CUX2-202ENST00000397643 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
CUX2-202ENST00000397643 SPDYE5A6NIY4 337 aa20.4■□□□□ 0.86
CUX2-202ENST00000397643 TMEM106CQ9BVX2 250 aa20.4■□□□□ 0.86
CUX2-202ENST00000397643 SNCAIPQ9Y6H5 919 aa20.4■□□□□ 0.86
CUX2-202ENST00000397643 SZT2Q5T011 3432 aa20.39■□□□□ 0.86
CUX2-202ENST00000397643 ARHGAP39Q9C0H5 1083 aa20.39■□□□□ 0.85
CUX2-202ENST00000397643 RIPOR2Q9Y4F9 1068 aa20.39■□□□□ 0.85
CUX2-202ENST00000397643 CSADQ9Y600 493 aa20.39■□□□□ 0.85
CUX2-202ENST00000397643 TNNI2P48788 182 aa20.38■□□□□ 0.85
CUX2-202ENST00000397643 CACNB3P54284 484 aa20.38■□□□□ 0.85
CUX2-202ENST00000397643 FBXO33Q7Z6M2 555 aa20.38■□□□□ 0.85
CUX2-202ENST00000397643 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
CUX2-202ENST00000397643 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
CUX2-202ENST00000397643 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
CUX2-202ENST00000397643 COLQQ9Y215 455 aaPredicted RBP20.38■□□□□ 0.85
CUX2-202ENST00000397643 TLR2O60603 784 aa20.37■□□□□ 0.85
CUX2-202ENST00000397643 ARHGEF6Q15052 776 aa20.37■□□□□ 0.85
CUX2-202ENST00000397643 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
CUX2-202ENST00000397643 ZCCHC17Q9NP64 241 aaKnown RBP20.37■□□□□ 0.85
CUX2-202ENST00000397643 C9orf78Q9NZ63 289 aaPredicted RBP20.37■□□□□ 0.85
CUX2-202ENST00000397643 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
CUX2-202ENST00000397643 BTBD19C9JJ37 291 aa20.36■□□□□ 0.85
CUX2-202ENST00000397643 ALDH1L1O75891 902 aa20.36■□□□□ 0.85
CUX2-202ENST00000397643 LACTBP83111 547 aaPredicted RBP20.36■□□□□ 0.85
CUX2-202ENST00000397643 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
CUX2-202ENST00000397643 SH3TC2Q8TF17 1288 aa20.36■□□□□ 0.85
CUX2-202ENST00000397643 RANBP2P49792 3224 aaKnown RBP20.36■□□□□ 0.85
CUX2-202ENST00000397643 IRF6O14896 467 aa20.35■□□□□ 0.85
CUX2-202ENST00000397643 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
CUX2-202ENST00000397643 ERO1BQ86YB8 467 aa20.35■□□□□ 0.85
CUX2-202ENST00000397643 VGLL2Q8N8G2 317 aa20.35■□□□□ 0.85
CUX2-202ENST00000397643 WRNIP1Q96S55 665 aa20.35■□□□□ 0.85
CUX2-202ENST00000397643 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
CUX2-202ENST00000397643 UTYO14607 1347 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 MYCP01106 439 aaPredicted RBP20.34■□□□□ 0.85
CUX2-202ENST00000397643 CETPP11597 493 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
CUX2-202ENST00000397643 APOBEC3HQ6NTF7 200 aaKnown RBP20.34■□□□□ 0.85
CUX2-202ENST00000397643 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 ZKSCAN4Q969J2 545 aaPredicted RBP20.34■□□□□ 0.85
CUX2-202ENST00000397643 ZDHHC15Q96MV8 337 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
CUX2-202ENST00000397643 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.85
CUX2-202ENST00000397643 CTGFP29279 349 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 PPIL2Q13356 520 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 RABL6Q3YEC7 729 aaPredicted RBP20.33■□□□□ 0.85
CUX2-202ENST00000397643 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 TEKT1Q969V4 418 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 SHISA4Q96DD7 197 aa20.33■□□□□ 0.85
CUX2-202ENST00000397643 H0YGN5 161 aa20.32■□□□□ 0.84
CUX2-202ENST00000397643 SNAPC2Q13487 334 aa20.32■□□□□ 0.84
CUX2-202ENST00000397643 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
CUX2-202ENST00000397643 C17orf99Q6UX52 265 aa20.32■□□□□ 0.84
CUX2-202ENST00000397643 MRIQ9BWK5 157 aa20.32■□□□□ 0.84
CUX2-202ENST00000397643 SALL2Q9Y467 1007 aaPredicted RBP20.32■□□□□ 0.84
CUX2-202ENST00000397643 ADGRA2Q96PE1 1338 aa20.31■□□□□ 0.84
CUX2-202ENST00000397643 GNRH1P01148 92 aa20.31■□□□□ 0.84
CUX2-202ENST00000397643 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CUX2-202ENST00000397643 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
CUX2-202ENST00000397643 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
CUX2-202ENST00000397643 WDHD1O75717 1129 aaPredicted RBP20.29■□□□□ 0.84
CUX2-202ENST00000397643 PDE8BO95263 885 aa20.29■□□□□ 0.84
CUX2-202ENST00000397643 INPP5BP32019 993 aa20.29■□□□□ 0.84
CUX2-202ENST00000397643 BCAMP50895 628 aa20.29■□□□□ 0.84
CUX2-202ENST00000397643 PRMT2P55345 433 aa20.29■□□□□ 0.84
CUX2-202ENST00000397643 KIF22Q14807 665 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms