RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 HDLBPQ00341 1268 aaKnown RBP31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 FMR1Q06787 632 aaKnown RBP eCLIP31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 PRMT6Q96LA8 375 aaPredicted RBP31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 LRRCC1Q9C099 1032 aa31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 DCTPP1Q9H773 170 aa31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 HMG20BQ9P0W2 317 aa31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 DBNLQ9UJU6 430 aaKnown RBP31.08■■■□□ 2.57
TSPAN4-207ENST00000397411 PDS5AQ29RF7 1337 aaKnown RBP31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 PITPNM2Q9BZ72 1349 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 SALL1Q9NSC2 1324 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 SPDYE2BA6NHP3 402 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 SPDYE6P0CI01 402 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 HTRA3P83110 453 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 EXOC6Q8TAG9 804 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 TLR7Q9NYK1 1049 aaKnown RBP31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 PCDHAC2Q9Y5I4 1007 aa31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 COL1A1P02452 1464 aaPredicted RBP31.07■■■□□ 2.56
TSPAN4-207ENST00000397411 ZBED3Q96IU2 234 aaPredicted RBP31.06■■■□□ 2.56
TSPAN4-207ENST00000397411 MRIQ9BWK5 157 aa31.06■■■□□ 2.56
TSPAN4-207ENST00000397411 CELF2O95319 508 aaKnown RBP31.05■■■□□ 2.56
TSPAN4-207ENST00000397411 APOBEC3FQ8IUX4 373 aaKnown RBP31.05■■■□□ 2.56
TSPAN4-207ENST00000397411 SNRKQ9NRH2 765 aa31.05■■■□□ 2.56
TSPAN4-207ENST00000397411 CREBZFQ9NS37 354 aa31.05■■■□□ 2.56
TSPAN4-207ENST00000397411 TRPM7Q96QT4 1865 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 CLRN2A0PK11 232 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 PRDX5P30044 214 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 MCAMP43121 646 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 ERICH6Q7L0X2 663 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 DZIP1Q86YF9 867 aaKnown RBP31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 VEZTQ9HBM0 779 aa31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 SCAF8Q9UPN6 1271 aaKnown RBP31.04■■■□□ 2.56
TSPAN4-207ENST00000397411 ABT1Q9ULW3 272 aaKnown RBP31.03■■■□□ 2.56
TSPAN4-207ENST00000397411 IRX6P78412 446 aaPredicted RBP31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 HHIPL2Q6UWX4 724 aa31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 PI16Q6UXB8 463 aa31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 DLK2Q6UY11 383 aa31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 SLF2Q8IX21 1173 aa31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 ZNF512BQ96KM6 892 aaPredicted RBP31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 TDRD3Q9H7E2 651 aaKnown RBP31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 ZBTB47Q9UFB7 747 aaPredicted RBP31.02■■■□□ 2.56
TSPAN4-207ENST00000397411 SMARCA5O60264 1052 aaPredicted RBP31.01■■■□□ 2.55
TSPAN4-207ENST00000397411 TBC1D9Q6ZT07 1266 aa31.01■■■□□ 2.55
TSPAN4-207ENST00000397411 RAI14Q9P0K7 980 aa31.01■■■□□ 2.55
TSPAN4-207ENST00000397411 LRP2BPQ9P2M1 347 aa31.01■■■□□ 2.55
TSPAN4-207ENST00000397411 CDCA5Q96FF9 252 aa31■■■□□ 2.55
TSPAN4-207ENST00000397411 ZDHHC15Q96MV8 337 aa31■■■□□ 2.55
TSPAN4-207ENST00000397411 ZNF70Q9UC06 446 aaPredicted RBP31■■■□□ 2.55
TSPAN4-207ENST00000397411 DIXDC1Q155Q3 683 aa30.99■■■□□ 2.55
TSPAN4-207ENST00000397411 CST9Q5W186 159 aa30.99■■■□□ 2.55
TSPAN4-207ENST00000397411 TMOD2Q9NZR1 351 aa30.99■■■□□ 2.55
TSPAN4-207ENST00000397411 ECM29Q5VYK3 1845 aa30.98■■■□□ 2.55
TSPAN4-207ENST00000397411 RWDD1Q9H446 243 aaPredicted RBP30.98■■■□□ 2.55
TSPAN4-207ENST00000397411 ZAP70P43403 619 aa30.97■■■□□ 2.55
TSPAN4-207ENST00000397411 SPDYE2Q495Y8 402 aa30.97■■■□□ 2.55
TSPAN4-207ENST00000397411 PRAMEF18Q5VWM3 479 aa30.97■■■□□ 2.55
TSPAN4-207ENST00000397411 C2orf69Q8N8R5 385 aa30.97■■■□□ 2.55
TSPAN4-207ENST00000397411 NF2P35240 595 aa30.96■■■□□ 2.55
TSPAN4-207ENST00000397411 GSTO1P78417 241 aa30.96■■■□□ 2.55
TSPAN4-207ENST00000397411 HDAC1Q13547 482 aaPredicted RBP30.96■■■□□ 2.55
TSPAN4-207ENST00000397411 TNFAIP1Q13829 316 aa30.96■■■□□ 2.55
TSPAN4-207ENST00000397411 DEFB129Q9H1M3 183 aa30.96■■■□□ 2.55
TSPAN4-207ENST00000397411 LDHCP07864 332 aa30.95■■■□□ 2.55
TSPAN4-207ENST00000397411 TNNI2P48788 182 aa30.95■■■□□ 2.55
TSPAN4-207ENST00000397411 DAGLAQ9Y4D2 1042 aa30.95■■■□□ 2.55
TSPAN4-207ENST00000397411 AOX1Q06278 1338 aa30.95■■■□□ 2.54
TSPAN4-207ENST00000397411 TCP10L2B9ZVM9 353 aa30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 MECOMQ03112 1051 aa30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 APOBEC3HQ6NTF7 200 aaKnown RBP30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 MKRN1Q9UHC7 482 aaKnown RBP30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 AKAP11Q9UKA4 1901 aa30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 MYH2Q9UKX2 1941 aa30.94■■■□□ 2.54
TSPAN4-207ENST00000397411 CYP2E1P05181 493 aaPredicted RBP30.93■■■□□ 2.54
TSPAN4-207ENST00000397411 PAXIP1Q6ZW49 1069 aaPredicted RBP30.93■■■□□ 2.54
TSPAN4-207ENST00000397411 GCC1Q96CN9 775 aa30.93■■■□□ 2.54
TSPAN4-207ENST00000397411 GBA2Q9HCG7 927 aaPredicted RBP30.93■■■□□ 2.54
TSPAN4-207ENST00000397411 PPP2R3BQ9Y5P8 575 aa30.93■■■□□ 2.54
TSPAN4-207ENST00000397411 TTLL12Q14166 644 aaPredicted RBP30.92■■■□□ 2.54
TSPAN4-207ENST00000397411 DEFB115Q30KQ5 88 aa30.92■■■□□ 2.54
TSPAN4-207ENST00000397411 ANKRD45Q5TZF3 282 aa30.92■■■□□ 2.54
TSPAN4-207ENST00000397411 USP40Q9NVE5 1235 aa30.92■■■□□ 2.54
TSPAN4-207ENST00000397411 RASA3Q14644 834 aa30.91■■■□□ 2.54
TSPAN4-207ENST00000397411 GPATCH3Q96I76 525 aa30.91■■■□□ 2.54
TSPAN4-207ENST00000397411 CACNB3P54284 484 aa30.9■■■□□ 2.54
TSPAN4-207ENST00000397411 DNAJC2Q99543 621 aaKnown RBP30.9■■■□□ 2.54
TSPAN4-207ENST00000397411 NOL10Q9BSC4 688 aaKnown RBP30.9■■■□□ 2.54
TSPAN4-207ENST00000397411 TLL2Q9Y6L7 1015 aa30.9■■■□□ 2.54
TSPAN4-207ENST00000397411 NDUFB9Q9Y6M9 179 aa30.9■■■□□ 2.54
TSPAN4-207ENST00000397411 IDH1O75874 414 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 SUPT20HL1Q3ZLR7 823 aa30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 NAA16Q6N069 864 aaPredicted RBP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 DNAJC5GQ8N7S2 189 aa30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 NSUN4Q96CB9 384 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 FAM163AQ96GL9 167 aaPredicted RBP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 BOLA2Q9H3K6 86 aa30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 PIH1D3Q9NQM4 214 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-207ENST00000397411 ATP5JP18859 108 aa30.88■■■□□ 2.53
TSPAN4-207ENST00000397411 TTF1Q15361 905 aaPredicted RBP30.88■■■□□ 2.53
TSPAN4-207ENST00000397411 CDC42EP5Q6NZY7 148 aa30.88■■■□□ 2.53
TSPAN4-207ENST00000397411 KLRG1Q96E93 195 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms