RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SLIT2O94813 1529 aa27.78■■■□□ 2.04
PABPN1-202ENST00000397276 SPATA5Q8NB90 893 aa27.78■■■□□ 2.04
PABPN1-202ENST00000397276 ZNF512BQ96KM6 892 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-202ENST00000397276 ZHX1Q9UKY1 873 aaPredicted RBP27.78■■■□□ 2.04
PABPN1-202ENST00000397276 ARID4AP29374 1257 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-202ENST00000397276 EVCP57679 992 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 ORC3Q9UBD5 711 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-202ENST00000397276 RCOR1Q9UKL0 485 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 MROH5Q6ZUA9 1318 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 FGFR2P21802 821 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 ME1P48163 572 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 RASGRF1Q13972 1273 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 UBE3CQ15386 1083 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 CYB5R4Q7L1T6 521 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 SMAP1Q8IYB5 467 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-202ENST00000397276 MAGEB6Q8N7X4 407 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 ROBO1Q9Y6N7 1651 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 KCNQ2O43526 872 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 UQCRFS1P1P0C7P4 283 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 SLC5A1P13866 664 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 FBXL16Q8N461 479 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 C8orf76Q96K31 380 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 GOLPH3LQ9H4A5 285 aa27.77■■■□□ 2.04
PABPN1-202ENST00000397276 B4E1Z4 1266 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 BCAMP50895 628 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 KCNQ4P56696 695 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 CCDC144CPQ8IYA2 1237 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 ZNF396Q96N95 335 aaPredicted RBP27.76■■■□□ 2.03
PABPN1-202ENST00000397276 DNAJC25Q9H1X3 360 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 CBX8Q9HC52 389 aa27.76■■■□□ 2.03
PABPN1-202ENST00000397276 CAMTA2O94983 1202 aa27.75■■■□□ 2.03
PABPN1-202ENST00000397276 STK11IPQ8N1F8 1099 aa27.75■■■□□ 2.03
PABPN1-202ENST00000397276 SENP2Q9HC62 589 aa27.75■■■□□ 2.03
PABPN1-202ENST00000397276 IQSEC3Q9UPP2 1182 aaPredicted RBP27.75■■■□□ 2.03
PABPN1-202ENST00000397276 AKAP11Q9UKA4 1901 aa27.75■■■□□ 2.03
PABPN1-202ENST00000397276 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
PABPN1-202ENST00000397276 TCRBV5S4A2TA0A5A2 114 aa27.74■■■□□ 2.03
PABPN1-202ENST00000397276 CBX1P83916 185 aa27.74■■■□□ 2.03
PABPN1-202ENST00000397276 DHX16O60231 1041 aaKnown RBP27.74■■■□□ 2.03
PABPN1-202ENST00000397276 STRBPQ96SI9 672 aaKnown RBP27.74■■■□□ 2.03
PABPN1-202ENST00000397276 A0A087WWV3 80 aa27.73■■■□□ 2.03
PABPN1-202ENST00000397276 ARMT1Q9H993 441 aa27.73■■■□□ 2.03
PABPN1-202ENST00000397276 PYCARDQ9ULZ3 195 aa27.73■■■□□ 2.03
PABPN1-202ENST00000397276 DOT1LQ8TEK3 1739 aa27.73■■■□□ 2.03
PABPN1-202ENST00000397276 MBD4O95243 580 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 ERCC4Q92889 916 aaPredicted RBP27.72■■■□□ 2.03
PABPN1-202ENST00000397276 PRIMPOLQ96LW4 560 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 CTDSPL2Q05D32 466 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 RBM43Q6ZSC3 357 aaKnown RBP27.72■■■□□ 2.03
PABPN1-202ENST00000397276 SMIM5Q71RC9 77 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 CHMP4CQ96CF2 233 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 AIFM3Q96NN9 605 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 MYH3P11055 1940 aa27.72■■■□□ 2.03
PABPN1-202ENST00000397276 MYO5AQ9Y4I1 1855 aaKnown RBP27.72■■■□□ 2.03
PABPN1-202ENST00000397276 CCDC152Q4G0S7 254 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 KCNF1Q9H3M0 494 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 ANGEL1Q9UNK9 670 aaKnown RBP27.71■■■□□ 2.03
PABPN1-202ENST00000397276 IGHMBP2P38935 993 aaKnown RBP27.71■■■□□ 2.03
PABPN1-202ENST00000397276 MAP3K12Q12852 859 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 MICU3Q86XE3 530 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 MYL10Q9BUA6 226 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 CDCA7Q9BWT1 371 aaPredicted RBP27.71■■■□□ 2.03
PABPN1-202ENST00000397276 CLIC4Q9Y696 253 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 ANKRD36CQ5JPF3 1778 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 NEDD4P46934 1319 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 ZNF165P49910 485 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 CCDC73Q6ZRK6 1079 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 FBXO18Q8NFZ0 1043 aa27.71■■■□□ 2.03
PABPN1-202ENST00000397276 PRKAB2O43741 272 aa27.7■■■□□ 2.02
PABPN1-202ENST00000397276 FSIP1Q8NA03 581 aa27.7■■■□□ 2.02
PABPN1-202ENST00000397276 FBXW7Q969H0 707 aa27.7■■■□□ 2.02
PABPN1-202ENST00000397276 EPB41L4AQ9HCS5 686 aaPredicted RBP27.7■■■□□ 2.02
PABPN1-202ENST00000397276 WTIPA6NIX2 430 aaPredicted RBP27.69■■■□□ 2.02
PABPN1-202ENST00000397276 METAP2P50579 478 aaKnown RBP eCLIP27.69■■■□□ 2.02
PABPN1-202ENST00000397276 SNW1Q13573 536 aaKnown RBP27.69■■■□□ 2.02
PABPN1-202ENST00000397276 IFNL3Q8IZI9 196 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 KLHL34Q8N239 644 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 NAPBQ9H115 298 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 SPTLC3Q9NUV7 552 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 PCDHA7Q9UN72 937 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 NTSR2O95665 410 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 NFXL1Q6ZNB6 911 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 MIGA1Q8NAN2 632 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 PHKBQ93100 1093 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 AK7Q96M32 723 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 BCL2L12Q9HB09 334 aa27.69■■■□□ 2.02
PABPN1-202ENST00000397276 PIP4K2BP78356 416 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 SF3A1Q15459 793 aaKnown RBP27.68■■■□□ 2.02
PABPN1-202ENST00000397276 PPP4R3BQ5MIZ7 849 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 A0A1B0GVL5 298 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 KIF28PB7ZC32 967 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 ZSCAN20P17040 1043 aaPredicted RBP27.68■■■□□ 2.02
PABPN1-202ENST00000397276 PARP10Q53GL7 1025 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 BICDL1Q6ZP65 573 aa27.68■■■□□ 2.02
PABPN1-202ENST00000397276 PATL2C9JE40 543 aaKnown RBP27.67■■■□□ 2.02
PABPN1-202ENST00000397276 SH2B2O14492 632 aaPredicted RBP27.67■■■□□ 2.02
PABPN1-202ENST00000397276 GTF2F1P35269 517 aaKnown RBP eCLIP27.67■■■□□ 2.021e-11■■■■■ 33.7
PABPN1-202ENST00000397276 CHRNDQ07001 517 aa27.67■■■□□ 2.02
PABPN1-202ENST00000397276 TOMM22Q9NS69 142 aa27.67■■■□□ 2.02
PABPN1-202ENST00000397276 THRAP3Q9Y2W1 955 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms