RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RGMBQ6NW40 437 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 DEFB129Q9H1M3 183 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 PCDHAC2Q9Y5I4 1007 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 ECM29Q5VYK3 1845 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 ADORA1P30542 326 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 CCDC102AQ96A19 550 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
SEC13-208ENST00000397109 NOGQ13253 232 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 OS9Q13438 667 aaPredicted RBP17.96■□□□□ 0.47
SEC13-208ENST00000397109 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 GRIK5Q16478 980 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 VEZTQ9HBM0 779 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 PAPPA2Q9BXP8 1791 aa17.96■□□□□ 0.47
SEC13-208ENST00000397109 SURF6O75683 361 aaKnown RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 ZNF157P51786 506 aaPredicted RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 ZGPATQ8N5A5 531 aaKnown RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 GPR108Q9NPR9 543 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 ZNF70Q9UC06 446 aaPredicted RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 SALL1Q9NSC2 1324 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 AOC2O75106 756 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 TTLL12Q14166 644 aaPredicted RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 SUPT20HL1Q3ZLR7 823 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 CEP85Q6P2H3 762 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 HHIPL2Q6UWX4 724 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 BEGAINQ9BUH8 593 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 TDRD3Q9H7E2 651 aaKnown RBP17.95■□□□□ 0.46
SEC13-208ENST00000397109 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
SEC13-208ENST00000397109 PDS5AQ29RF7 1337 aaKnown RBP17.94■□□□□ 0.46
SEC13-208ENST00000397109 LDHBP07195 334 aaKnown RBP17.94■□□□□ 0.46
SEC13-208ENST00000397109 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
SEC13-208ENST00000397109 THSD7BQ9C0I4 1608 aa17.93■□□□□ 0.46
SEC13-208ENST00000397109 TNNI2P48788 182 aa17.93■□□□□ 0.46
SEC13-208ENST00000397109 CTCFP49711 727 aaPredicted RBP17.93■□□□□ 0.46
SEC13-208ENST00000397109 RASA3Q14644 834 aa17.93■□□□□ 0.46
SEC13-208ENST00000397109 TMOD2Q9NZR1 351 aa17.93■□□□□ 0.46
SEC13-208ENST00000397109 UBE2Q2LH0YL09 131 aa17.92■□□□□ 0.46
SEC13-208ENST00000397109 FOXN1O15353 648 aa17.92■□□□□ 0.46
SEC13-208ENST00000397109 PPP1R12BO60237 982 aaPredicted RBP17.92■□□□□ 0.46
SEC13-208ENST00000397109 RASGRF1Q13972 1273 aa17.92■□□□□ 0.46
SEC13-208ENST00000397109 SPTY2D1Q68D10 685 aaPredicted RBP17.92■□□□□ 0.46
SEC13-208ENST00000397109 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
SEC13-208ENST00000397109 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
SEC13-208ENST00000397109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.92■□□□□ 0.46
SEC13-208ENST00000397109 AOX1Q06278 1338 aa17.92■□□□□ 0.46
SEC13-208ENST00000397109 FAM155AB1AL88 458 aaPredicted RBP17.91■□□□□ 0.46
SEC13-208ENST00000397109 SLC10A3P09131 477 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 PRDX5P30044 214 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 TNNI3KQ59H18 835 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 FPGT-TNNI3KV9GXZ4 949 aa17.91■□□□□ 0.46
SEC13-208ENST00000397109 CA12O43570 354 aa17.9■□□□□ 0.46
SEC13-208ENST00000397109 HMMRO75330 724 aa17.9■□□□□ 0.46
SEC13-208ENST00000397109 UQCRFS1P1P0C7P4 283 aa17.9■□□□□ 0.46
SEC13-208ENST00000397109 FKBP1CQ5VVH2 108 aa17.9■□□□□ 0.46
SEC13-208ENST00000397109 APOBEC3HQ6NTF7 200 aaKnown RBP17.9■□□□□ 0.46
SEC13-208ENST00000397109 MOB2Q70IA6 237 aa17.9■□□□□ 0.46
SEC13-208ENST00000397109 UNCXA6NJT0 531 aa17.89■□□□□ 0.45
SEC13-208ENST00000397109 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
SEC13-208ENST00000397109 ARID4AP29374 1257 aaPredicted RBP17.89■□□□□ 0.45
SEC13-208ENST00000397109 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
SEC13-208ENST00000397109 REM2Q8IYK8 340 aaPredicted RBP17.89■□□□□ 0.45
SEC13-208ENST00000397109 PRDM10Q9NQV6 1147 aa17.89■□□□□ 0.45
SEC13-208ENST00000397109 ANGEL1Q9UNK9 670 aaKnown RBP17.89■□□□□ 0.45
SEC13-208ENST00000397109 PRKG1Q13976 671 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 LDLRAD1Q5T700 205 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
SEC13-208ENST00000397109 FAM83AQ86UY5 434 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 RASAL3Q86YV0 1011 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 ABCF2Q9UG63 623 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 KIF23Q02241 960 aaPredicted RBP17.88■□□□□ 0.45
SEC13-208ENST00000397109 DZIP1Q86YF9 867 aaKnown RBP17.88■□□□□ 0.45
SEC13-208ENST00000397109 SPATA5Q8NB90 893 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 HMG20BQ9P0W2 317 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 DAGLAQ9Y4D2 1042 aa17.88■□□□□ 0.45
SEC13-208ENST00000397109 IREB2P48200 963 aaKnown RBP17.87■□□□□ 0.45
SEC13-208ENST00000397109 DIXDC1Q155Q3 683 aa17.87■□□□□ 0.45
SEC13-208ENST00000397109 TTC39AQ5SRH9 613 aa17.87■□□□□ 0.45
SEC13-208ENST00000397109 ERICH6Q7L0X2 663 aa17.87■□□□□ 0.45
SEC13-208ENST00000397109 ZIC5Q96T25 663 aa17.87■□□□□ 0.45
SEC13-208ENST00000397109 DBNDD2Q9BQY9 259 aa17.87■□□□□ 0.45
SEC13-208ENST00000397109 HSPA8P11142 646 aaKnown RBP17.86■□□□□ 0.45
SEC13-208ENST00000397109 COL13A1Q5TAT6 717 aaPredicted RBP17.86■□□□□ 0.45
SEC13-208ENST00000397109 C20orf194Q5TEA3 1177 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms