RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 WDHD1O75717 1129 aaPredicted RBP19.05■□□□□ 0.64
SEC13-206ENST00000397102 TNNI2P48788 182 aa19.05■□□□□ 0.64
SEC13-206ENST00000397102 TDRD7Q8NHU6 1098 aaKnown RBP19.05■□□□□ 0.64
SEC13-206ENST00000397102 H0YGN5 161 aa19.04■□□□□ 0.64
SEC13-206ENST00000397102 KIF22Q14807 665 aa19.04■□□□□ 0.64
SEC13-206ENST00000397102 LDHAL6AQ6ZMR3 332 aa19.04■□□□□ 0.64
SEC13-206ENST00000397102 DZIP1LQ8IYY4 767 aaKnown RBP19.04■□□□□ 0.64
SEC13-206ENST00000397102 OTUD5Q96G74 571 aa19.04■□□□□ 0.64
SEC13-206ENST00000397102 ZCCHC17Q9NP64 241 aaKnown RBP19.04■□□□□ 0.64
SEC13-206ENST00000397102 SPDYE5A6NIY4 337 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 TCP10L2B9ZVM9 353 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 PLIN1O60240 522 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 TLR2O60603 784 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 GNRH1P01148 92 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 LACTBP83111 547 aaPredicted RBP19.03■□□□□ 0.64
SEC13-206ENST00000397102 SH3TC2Q8TF17 1288 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 TMEM39BQ9GZU3 492 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 TRIOBPQ9H2D6 2365 aa19.03■□□□□ 0.64
SEC13-206ENST00000397102 MYCP01106 439 aaPredicted RBP19.02■□□□□ 0.64
SEC13-206ENST00000397102 CETPP11597 493 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 CRKP46108 304 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 PRMT2P55345 433 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 CCDC27Q2M243 656 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 CCDC57Q2TAC2 916 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 LMBR1LQ6UX01 489 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
SEC13-206ENST00000397102 ARHGAP39Q9C0H5 1083 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 CNNM1Q9NRU3 951 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 CEP290O15078 2479 aa19.02■□□□□ 0.64
SEC13-206ENST00000397102 HIBADHP31937 336 aaKnown RBP19.01■□□□□ 0.63
SEC13-206ENST00000397102 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
SEC13-206ENST00000397102 SNCAIPQ9Y6H5 919 aa19.01■□□□□ 0.63
SEC13-206ENST00000397102 GYG1P46976 350 aa19■□□□□ 0.63
SEC13-206ENST00000397102 ERO1BQ86YB8 467 aa19■□□□□ 0.63
SEC13-206ENST00000397102 WWC1Q8IX03 1113 aa19■□□□□ 0.63
SEC13-206ENST00000397102 IL16Q14005 1332 aa19■□□□□ 0.63
SEC13-206ENST00000397102 BTBD19C9JJ37 291 aa18.99■□□□□ 0.63
SEC13-206ENST00000397102 EPHA10Q5JZY3 1008 aa18.99■□□□□ 0.63
SEC13-206ENST00000397102 BEND3Q5T5X7 828 aa18.99■□□□□ 0.63
SEC13-206ENST00000397102 CHRDL2Q6WN34 429 aa18.99■□□□□ 0.63
SEC13-206ENST00000397102 FAM84BQ96KN1 310 aaPredicted RBP18.99■□□□□ 0.63
SEC13-206ENST00000397102 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
SEC13-206ENST00000397102 SNAPC2Q13487 334 aa18.98■□□□□ 0.63
SEC13-206ENST00000397102 SHISA4Q96DD7 197 aa18.98■□□□□ 0.63
SEC13-206ENST00000397102 F6X3S4 739 aa18.97■□□□□ 0.63
SEC13-206ENST00000397102 IRF6O14896 467 aa18.97■□□□□ 0.63
SEC13-206ENST00000397102 PPIL2Q13356 520 aa18.97■□□□□ 0.63
SEC13-206ENST00000397102 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
SEC13-206ENST00000397102 GRM8O00222 908 aa18.96■□□□□ 0.63
SEC13-206ENST00000397102 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
SEC13-206ENST00000397102 DPF3Q92784 378 aa18.96■□□□□ 0.63
SEC13-206ENST00000397102 HOOK2Q96ED9 719 aa18.96■□□□□ 0.63
SEC13-206ENST00000397102 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
SEC13-206ENST00000397102 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
SEC13-206ENST00000397102 VAMP4O75379 141 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 CACNB3P54284 484 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 MTFR1Q15390 333 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 GRIK5Q16478 980 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 C17orf99Q6UX52 265 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 FAM83AQ86UY5 434 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 TBC1D22AQ8WUA7 517 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 ZKSCAN4Q969J2 545 aaPredicted RBP18.95■□□□□ 0.62
SEC13-206ENST00000397102 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 TMOD2Q9NZR1 351 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 SRRDQ9UH36 339 aa18.95■□□□□ 0.62
SEC13-206ENST00000397102 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
SEC13-206ENST00000397102 PPATQ06203 517 aa18.94■□□□□ 0.62
SEC13-206ENST00000397102 FKBP1CQ5VVH2 108 aa18.94■□□□□ 0.62
SEC13-206ENST00000397102 HOXD10P28358 340 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 CTGFP29279 349 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 GRK4P32298 578 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 PSMC4P43686 418 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
SEC13-206ENST00000397102 DCAF15Q66K64 600 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 FBXO33Q7Z6M2 555 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 VPS37DQ86XT2 251 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 HTATIP2Q9BUP3 242 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 PUS3Q9BZE2 481 aaKnown RBP18.93■□□□□ 0.62
SEC13-206ENST00000397102 CPA4Q9UI42 421 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 MROH5Q6ZUA9 1318 aa18.93■□□□□ 0.62
SEC13-206ENST00000397102 OSBPP22059 807 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 GJA8P48165 433 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
SEC13-206ENST00000397102 UBE2Q1Q7Z7E8 422 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 ANKRD23Q86SG2 305 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 RAET1EQ8TD07 263 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 TRIM47Q96LD4 638 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
SEC13-206ENST00000397102 IQSEC3Q9UPP2 1182 aaPredicted RBP18.92■□□□□ 0.62
SEC13-206ENST00000397102 RIPOR2Q9Y4F9 1068 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 ADGRA2Q96PE1 1338 aa18.92■□□□□ 0.62
SEC13-206ENST00000397102 SZT2Q5T011 3432 aa18.91■□□□□ 0.62
SEC13-206ENST00000397102 MGAMO43451 1857 aa18.91■□□□□ 0.62
SEC13-206ENST00000397102 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
SEC13-206ENST00000397102 ECM2O94769 699 aaPredicted RBP18.91■□□□□ 0.62
SEC13-206ENST00000397102 GJB1P08034 283 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms