RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
SEC13-205ENST00000397101 PTCH2Q9Y6C5 1203 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 AOX1Q06278 1338 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 GNRH1P01148 92 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
SEC13-205ENST00000397101 PRMT2P55345 433 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 MAP3K9P80192 1104 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 FLIIQ13045 1269 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 TAF1CQ15572 869 aaPredicted RBP17.17■□□□□ 0.34
SEC13-205ENST00000397101 TEPSINQ96N21 525 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 ELP3Q9H9T3 547 aa17.17■□□□□ 0.34
SEC13-205ENST00000397101 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
SEC13-205ENST00000397101 ZNF70Q9UC06 446 aaPredicted RBP17.17■□□□□ 0.34
SEC13-205ENST00000397101 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
SEC13-205ENST00000397101 WDHD1O75717 1129 aaPredicted RBP17.16■□□□□ 0.34
SEC13-205ENST00000397101 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEC13-205ENST00000397101 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
SEC13-205ENST00000397101 CCL15Q16663 113 aa17.16■□□□□ 0.34
SEC13-205ENST00000397101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEC13-205ENST00000397101 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
SEC13-205ENST00000397101 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
SEC13-205ENST00000397101 TLR2O60603 784 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 FOXO4P98177 505 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 HELBQ8NG08 1087 aaPredicted RBP17.15■□□□□ 0.34
SEC13-205ENST00000397101 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
SEC13-205ENST00000397101 CSADQ9Y600 493 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
SEC13-205ENST00000397101 BCAR3O75815 825 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 TNNI2P48788 182 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
SEC13-205ENST00000397101 VGLL4Q14135 290 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
SEC13-205ENST00000397101 FAM43AQ8N2R8 423 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
SEC13-205ENST00000397101 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
SEC13-205ENST00000397101 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
SEC13-205ENST00000397101 A0A1B0GUL6 1792 aa17.14■□□□□ 0.33
SEC13-205ENST00000397101 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
SEC13-205ENST00000397101 HDLBPQ00341 1268 aaKnown RBP17.13■□□□□ 0.33
SEC13-205ENST00000397101 KIF22Q14807 665 aa17.13■□□□□ 0.33
SEC13-205ENST00000397101 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
SEC13-205ENST00000397101 CETPP11597 493 aa17.12■□□□□ 0.33
SEC13-205ENST00000397101 LACTBP83111 547 aaPredicted RBP17.12■□□□□ 0.33
SEC13-205ENST00000397101 CCDC57Q2TAC2 916 aa17.12■□□□□ 0.33
SEC13-205ENST00000397101 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
SEC13-205ENST00000397101 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
SEC13-205ENST00000397101 H0YGN5 161 aa17.11■□□□□ 0.33
SEC13-205ENST00000397101 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
SEC13-205ENST00000397101 ERO1BQ86YB8 467 aa17.11■□□□□ 0.33
SEC13-205ENST00000397101 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
SEC13-205ENST00000397101 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
SEC13-205ENST00000397101 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
SEC13-205ENST00000397101 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 CRKP46108 304 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 BEND3Q5T5X7 828 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 LMBR1LQ6UX01 489 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 NKX2-3Q8TAU0 364 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 HOOK2Q96ED9 719 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
SEC13-205ENST00000397101 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 ARAP2Q8WZ64 1704 aa17.1■□□□□ 0.33
SEC13-205ENST00000397101 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
SEC13-205ENST00000397101 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 TAF7LQ5H9L4 462 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 NOB1Q9ULX3 412 aaKnown RBP17.09■□□□□ 0.33
SEC13-205ENST00000397101 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
SEC13-205ENST00000397101 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 BTBD19C9JJ37 291 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 PLIN1O60240 522 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 NEFLP07196 543 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
SEC13-205ENST00000397101 PPIL2Q13356 520 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 TBC1D22AQ8WUA7 517 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 LAMA3Q16787 3333 aa17.08■□□□□ 0.32
SEC13-205ENST00000397101 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 GRM8O00222 908 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 IRF6O14896 467 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 HOXD10P28358 340 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 SHISA4Q96DD7 197 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
SEC13-205ENST00000397101 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
SEC13-205ENST00000397101 CEP290O15078 2479 aa17.06■□□□□ 0.32
SEC13-205ENST00000397101 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
SEC13-205ENST00000397101 GYG1P46976 350 aa17.06■□□□□ 0.32
SEC13-205ENST00000397101 PPATQ06203 517 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms