RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ARHGAP27Q6ZUM4 889 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 SUGT1Q9Y2Z0 365 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 PRDX5P30044 214 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 DDIT3P35638 169 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 MFSD14BQ5SR56 506 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 KCNQ5Q9NR82 932 aa17.81■□□□□ 0.44
TM9SF1-202ENST00000396854 RAD50Q92878 1312 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 CHGBP05060 677 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 PDE6AP16499 860 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 NMIQ13287 307 aaPredicted RBP17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 SLC9C2Q5TAH2 1124 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 RUFY2Q8WXA3 655 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 ESYT1Q9BSJ8 1104 aa17.8■□□□□ 0.44
TM9SF1-202ENST00000396854 A0A0D9SFI3 127 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 TCRBV5S4A2TA0A5A2 114 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 DACT2Q5SW24 774 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 CWC27Q6UX04 472 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 FAM227BQ96M60 508 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 RAI14Q9P0K7 980 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 LDHBP07195 334 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 LMNB1P20700 586 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 MAGEB6Q8N7X4 407 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 APPBP2Q92624 585 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 NSUN4Q96CB9 384 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 ZNF532Q9HCE3 1301 aa17.79■□□□□ 0.44
TM9SF1-202ENST00000396854 SGSM2O43147 1006 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 CERS5Q8N5B7 392 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 ZNF384Q8TF68 577 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 MECOMQ03112 1051 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 GRIK5Q16478 980 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 KIF2CQ99661 725 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 IL25Q9H293 177 aa17.78■□□□□ 0.44
TM9SF1-202ENST00000396854 FZD9O00144 591 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 GPR162Q16538 588 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 MCMDC2Q4G0Z9 681 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 MAST3O60307 1309 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 MYO3BQ8WXR4 1341 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 VIL1P09327 827 aaKnown RBP17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 MXD3Q9BW11 206 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
TM9SF1-202ENST00000396854 PSMD14O00487 310 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 RAD17O75943 681 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 CXCL9Q07325 125 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 M0R2C6 588 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 CYP7A1P22680 504 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 GSTO1P78417 241 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 RSBN1LQ6PCB5 846 aaPredicted RBP17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
TM9SF1-202ENST00000396854 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 REC8O95072 547 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 ADGRA1Q86SQ6 560 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 CCDC171Q6TFL3 1326 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 UTRNP46939 3433 aa17.74■□□□□ 0.43
TM9SF1-202ENST00000396854 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 SLF2Q8IX21 1173 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 TTF2Q9UNY4 1162 aaKnown RBP17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 FOCADQ5VW36 1801 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 FSD2A1L4K1 749 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 LDHCP07864 332 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 TNIP1Q15025 636 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 GMLQ99445 158 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 GAKO14976 1311 aa17.73■□□□□ 0.43
TM9SF1-202ENST00000396854 DIXDC1Q155Q3 683 aa17.72■□□□□ 0.43
TM9SF1-202ENST00000396854 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
TM9SF1-202ENST00000396854 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
TM9SF1-202ENST00000396854 MRIQ9BWK5 157 aa17.72■□□□□ 0.43
TM9SF1-202ENST00000396854 GPAA1O43292 621 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 TRAK2O60296 914 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 USP26Q9BXU7 913 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms