RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
PDXDC1-202ENST00000396410 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.26
PDXDC1-202ENST00000396410 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.26
PDXDC1-202ENST00000396410 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.26
PDXDC1-202ENST00000396410 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.26
PDXDC1-202ENST00000396410 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 STX1AQ16623 288 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 CEP57L1Q8IYX8 460 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 MRPS27Q92552 414 aaKnown RBP13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
PDXDC1-202ENST00000396410 CYP7A1P22680 504 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 PGBD1Q96JS3 809 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 KRT23Q9C075 422 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 CBX8Q9HC52 389 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 SNAP23O00161 211 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 BCAMP50895 628 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 CAVIN2O95810 425 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 AK7Q96M32 723 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 LAMB4A4D0S4 1761 aa13.44□□□□□ -0.26
PDXDC1-202ENST00000396410 BCL9O00512 1426 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 SPTLC2O15270 562 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 WASF1Q92558 559 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 PATL2C9JE40 543 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 NRDCO43847 1150 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 UQCRHP07919 91 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 CTDNEP1O95476 244 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 GNAT2P19087 354 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 FAM13BQ9NYF5 915 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 TCHHQ07283 1943 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 A0A1B0GVL5 298 aa13.43□□□□□ -0.26
PDXDC1-202ENST00000396410 UBN2Q6ZU65 1347 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 ZKSCAN3Q9BRR0 538 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 ZPR1O75312 459 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 NOLC1Q14978 699 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■■□□□ 12.8
PDXDC1-202ENST00000396410 WTAPQ15007 396 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 PHKBQ93100 1093 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 RCOR1Q9UKL0 485 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 THRAP3Q9Y2W1 955 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 CHRNDQ07001 517 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
PDXDC1-202ENST00000396410 FBXO18Q8NFZ0 1043 aa13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 XBP1P17861 261 aa13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
PDXDC1-202ENST00000396410 ZMYM6O95789 1325 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 BIN1O00499 593 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 SMC2O95347 1197 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 RTN1Q16799 776 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
PDXDC1-202ENST00000396410 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.27
PDXDC1-202ENST00000396410 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.27
PDXDC1-202ENST00000396410 HOOK1Q9UJC3 728 aaKnown RBP13.4□□□□□ -0.27
PDXDC1-202ENST00000396410 CLIC4Q9Y696 253 aa13.4□□□□□ -0.27
PDXDC1-202ENST00000396410 PTGS1P23219 599 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 FILIP1Q7Z7B0 1213 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms