RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ACSBG1Q96GR2 724 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 AIFM3Q96NN9 605 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 MYL10Q9BUA6 226 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 MAST3O60307 1309 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 AFF2P51816 1311 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 HIP1O00291 1037 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 IL15P40933 162 aaPredicted RBP10.86□□□□□ -0.67
NDE1-201ENST00000396354 HMGN5P82970 282 aaKnown RBP10.86□□□□□ -0.67
NDE1-201ENST00000396354 MCMDC2Q4G0Z9 681 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 SPECC1Q5M775 1068 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 ZSCAN25Q6NSZ9 544 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 ZNF75DP51815 510 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 STK38Q15208 465 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
NDE1-201ENST00000396354 SPATA31A5Q5VU36 1347 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 SPATA31A7Q8IWB4 1347 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 CSF1RP07333 972 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 CREBRFQ8IUR6 639 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 HELBQ8NG08 1087 aaPredicted RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 MYH3P11055 1940 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 PCCAP05165 728 aaPredicted RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 SKILP12757 684 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 FAM98CQ17RN3 349 aaKnown RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 FNBP4Q8N3X1 1017 aaPredicted RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
NDE1-201ENST00000396354 TTLL11Q8NHH1 800 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 XAGE2Q96GT9 111 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 CLSTN2Q9H4D0 955 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 SH3TC1Q8TE82 1336 aa10.85□□□□□ -0.67
NDE1-201ENST00000396354 UBE2Q2LH0YL09 131 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 CCDC112Q8NEF3 446 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 CCDC94Q9BW85 323 aaPredicted RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 IDH1O75874 414 aaKnown RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 TSGA10IPQ3SY00 556 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 ZMYM1Q5SVZ6 1142 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 MARCH10Q8NA82 808 aaPredicted RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 CIAO1O76071 339 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 KCNQ4P56696 695 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 ITPK1Q13572 414 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 CMTR1Q8N1G2 835 aaKnown RBP10.84□□□□□ -0.67
NDE1-201ENST00000396354 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 RIPOR2Q9Y4F9 1068 aa10.84□□□□□ -0.67
NDE1-201ENST00000396354 RFX7Q2KHR2 1363 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 KLF18A0A0U1RQI7 1052 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 E7EWF7 191 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 ITGA6P23229 1130 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 ZAP70P43403 619 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 CCDC57Q2TAC2 916 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 INTS5Q6P9B9 1019 aaKnown RBP10.83□□□□□ -0.68
NDE1-201ENST00000396354 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 PHKBQ93100 1093 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 PRIMPOLQ96LW4 560 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 DDX19AQ9NUU7 478 aaKnown RBP10.83□□□□□ -0.68
NDE1-201ENST00000396354 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 KCNQ2O43526 872 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 STARD3NLO95772 234 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 HSPD1P10809 573 aaKnown RBP10.83□□□□□ -0.68
NDE1-201ENST00000396354 RESTQ13127 1097 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
NDE1-201ENST00000396354 MAP7D2Q96T17 732 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 PLA2G12BQ9BX93 195 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 IQSEC3Q9UPP2 1182 aaPredicted RBP10.83□□□□□ -0.68
NDE1-201ENST00000396354 CLIC4Q9Y696 253 aa10.83□□□□□ -0.68
NDE1-201ENST00000396354 EXOC5O00471 708 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 MCAMP43121 646 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 VPS72Q15906 364 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 TTC39AQ5SRH9 613 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 HOMER1Q86YM7 354 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 SPEF2Q9C093 1822 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 NDUFA8P51970 172 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 DPCR1Q3MIW9 517 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 DHX32Q7L7V1 743 aaKnown RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 HS6ST3Q8IZP7 471 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 TAF1P21675 1872 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 WTIPA6NIX2 430 aaPredicted RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 CTSWP56202 376 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 SLC4A8Q2Y0W8 1093 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 RALYLQ86SE5 291 aaKnown RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 ZKSCAN3Q9BRR0 538 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
NDE1-201ENST00000396354 LRP5O75197 1615 aa10.82□□□□□ -0.68
NDE1-201ENST00000396354 MYH7P12883 1935 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms