RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.52
HOXA3-202ENST00000396352 GSDMDP57764 484 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 SF3A1Q15459 793 aaKnown RBP18.27■□□□□ 0.51
HOXA3-202ENST00000396352 AXDND1Q5T1B0 1012 aaPredicted RBP18.27■□□□□ 0.51
HOXA3-202ENST00000396352 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 NCOA7Q8NI08 942 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 ABCC12Q96J65 1359 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 FEZ1Q99689 392 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 NBPF3Q9H094 633 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 IMPACTQ9P2X3 320 aa18.27■□□□□ 0.51
HOXA3-202ENST00000396352 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
HOXA3-202ENST00000396352 KIF23Q02241 960 aaPredicted RBP18.26■□□□□ 0.51
HOXA3-202ENST00000396352 GORABQ5T7V8 394 aa18.26■□□□□ 0.51
HOXA3-202ENST00000396352 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
HOXA3-202ENST00000396352 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
HOXA3-202ENST00000396352 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
HOXA3-202ENST00000396352 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
HOXA3-202ENST00000396352 TRMT1Q9NXH9 659 aaKnown RBP18.25■□□□□ 0.51
HOXA3-202ENST00000396352 GPAA1O43292 621 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 ZNF202O95125 648 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
HOXA3-202ENST00000396352 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
HOXA3-202ENST00000396352 WDR17Q8IZU2 1322 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 NCAPHQ15003 741 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 ANO1Q5XXA6 986 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
HOXA3-202ENST00000396352 PFKFB1P16118 471 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 ZNF213O14771 459 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 SLC3A2P08195 630 aaKnown RBP18.24■□□□□ 0.51
HOXA3-202ENST00000396352 NLRP12P59046 1061 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
HOXA3-202ENST00000396352 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
HOXA3-202ENST00000396352 DENND2AQ9ULE3 1009 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 CPLX1O14810 134 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 WDHD1O75717 1129 aaPredicted RBP18.24■□□□□ 0.51
HOXA3-202ENST00000396352 CMA1P23946 247 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 ARMCX5Q6P1M9 558 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 IFNKQ9P0W0 207 aa18.24■□□□□ 0.51
HOXA3-202ENST00000396352 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
HOXA3-202ENST00000396352 ATRNO75882 1429 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 BIN1O00499 593 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 CSF1RP07333 972 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
HOXA3-202ENST00000396352 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
HOXA3-202ENST00000396352 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
HOXA3-202ENST00000396352 MCAMP43121 646 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
HOXA3-202ENST00000396352 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
HOXA3-202ENST00000396352 SLC39A14Q15043 492 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
HOXA3-202ENST00000396352 AIFM3Q96NN9 605 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 HSD3B7Q9H2F3 369 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 ZMYM6O95789 1325 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
HOXA3-202ENST00000396352 SMC2O95347 1197 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 TBC1D10CQ8IV04 446 aa18.22■□□□□ 0.51
HOXA3-202ENST00000396352 CCDC150Q8NCX0 1101 aa18.21■□□□□ 0.51
HOXA3-202ENST00000396352 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
HOXA3-202ENST00000396352 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.51
HOXA3-202ENST00000396352 DDX41Q9UJV9 622 aaKnown RBP18.21■□□□□ 0.51
HOXA3-202ENST00000396352 MYH3P11055 1940 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 ADD2P35612 726 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 KIF18AQ8NI77 898 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 BCL11BQ9C0K0 894 aaPredicted RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 MARCKSP29966 332 aaPredicted RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 HPSEQ9Y251 543 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 RIPOR2Q9Y4F9 1068 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
HOXA3-202ENST00000396352 PPP1R13BQ96KQ4 1090 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 TIGD1Q96MW7 591 aa18.2■□□□□ 0.5
HOXA3-202ENST00000396352 SH2B2O14492 632 aaPredicted RBP18.19■□□□□ 0.5
HOXA3-202ENST00000396352 IKBKBO14920 756 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 KCNJ6P48051 423 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 ZHX1Q9UKY1 873 aaPredicted RBP18.19■□□□□ 0.5
HOXA3-202ENST00000396352 KIF2AO00139 706 aaPredicted RBP18.19■□□□□ 0.5
HOXA3-202ENST00000396352 PTPAQ15257 358 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 SYNE4Q8N205 404 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 ALG1Q9BT22 464 aa18.19■□□□□ 0.5
HOXA3-202ENST00000396352 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.5
HOXA3-202ENST00000396352 KMT5BQ4FZB7 885 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 SHC4Q6S5L8 630 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 CADPS2Q86UW7 1296 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 SENP2Q9HC62 589 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.18■□□□□ 0.5
HOXA3-202ENST00000396352 V9GYY5 206 aaPredicted RBP18.18■□□□□ 0.5
HOXA3-202ENST00000396352 CDC27P30260 824 aa18.18■□□□□ 0.5
HOXA3-202ENST00000396352 METAP2P50579 478 aaKnown RBP eCLIP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms