RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 API5Q9BZZ5 524 aaKnown RBP20.44■□□□□ 0.86
DDR1-229ENST00000396342 IQSEC3Q9UPP2 1182 aaPredicted RBP20.44■□□□□ 0.86
DDR1-229ENST00000396342 SUGT1Q9Y2Z0 365 aa20.44■□□□□ 0.86
DDR1-229ENST00000396342 TCP10L2B9ZVM9 353 aa20.43■□□□□ 0.86
DDR1-229ENST00000396342 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
DDR1-229ENST00000396342 IFNL1Q8IU54 200 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 ANKRD44Q8N8A2 993 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 WDR66Q8TBY9 1149 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 LPIN2Q92539 896 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 CFHR5Q9BXR6 569 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 CEP126Q9P2H0 1117 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
DDR1-229ENST00000396342 CASP8AP2Q9UKL3 1982 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 EYA2O00167 538 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 SOX10P56693 466 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 FBXO46Q6PJ61 603 aaPredicted RBP20.41■□□□□ 0.86
DDR1-229ENST00000396342 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 HPS5Q9UPZ3 1129 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 PCDHAC2Q9Y5I4 1007 aa20.41■□□□□ 0.86
DDR1-229ENST00000396342 BCAMP50895 628 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 CLMNQ96JQ2 1002 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 MRIQ9BWK5 157 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 FZD1Q9UP38 647 aa20.4■□□□□ 0.86
DDR1-229ENST00000396342 USP2O75604 605 aaPredicted RBP20.39■□□□□ 0.85
DDR1-229ENST00000396342 MAP3K9P80192 1104 aa20.39■□□□□ 0.85
DDR1-229ENST00000396342 ELP3Q9H9T3 547 aa20.39■□□□□ 0.85
DDR1-229ENST00000396342 AKAP11Q9UKA4 1901 aa20.39■□□□□ 0.85
DDR1-229ENST00000396342 GTF2A2P52657 109 aa20.38■□□□□ 0.85
DDR1-229ENST00000396342 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
DDR1-229ENST00000396342 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
DDR1-229ENST00000396342 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
DDR1-229ENST00000396342 ZDHHC15Q96MV8 337 aa20.37■□□□□ 0.85
DDR1-229ENST00000396342 TMEM39BQ9GZU3 492 aa20.37■□□□□ 0.85
DDR1-229ENST00000396342 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
DDR1-229ENST00000396342 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
DDR1-229ENST00000396342 ATP2B3Q16720 1220 aa20.36■□□□□ 0.85
DDR1-229ENST00000396342 FKBP1CQ5VVH2 108 aa20.36■□□□□ 0.85
DDR1-229ENST00000396342 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
DDR1-229ENST00000396342 SIL1Q9H173 461 aa20.36■□□□□ 0.85
DDR1-229ENST00000396342 TRIM17Q9Y577 477 aa20.36■□□□□ 0.85
DDR1-229ENST00000396342 CIAO1O76071 339 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 IL15P40933 162 aaPredicted RBP20.35■□□□□ 0.85
DDR1-229ENST00000396342 HHIPL2Q6UWX4 724 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 FAM83AQ86UY5 434 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 SLF2Q8IX21 1173 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 VGLL2Q8N8G2 317 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 CDCA7LQ96GN5 454 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 ZFYVE28Q9HCC9 887 aa20.35■□□□□ 0.85
DDR1-229ENST00000396342 LDHBP07195 334 aaKnown RBP20.34■□□□□ 0.85
DDR1-229ENST00000396342 GNAI3P08754 354 aa20.34■□□□□ 0.85
DDR1-229ENST00000396342 DENND2AQ9ULE3 1009 aa20.34■□□□□ 0.85
DDR1-229ENST00000396342 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 SEMA3EO15041 775 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 CETPP11597 493 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 KIF22Q14807 665 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 CCL15Q16663 113 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.85
DDR1-229ENST00000396342 OTUD5Q96G74 571 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 WRNIP1Q96S55 665 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.85
DDR1-229ENST00000396342 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDR1-229ENST00000396342 FGFR2P21802 821 aa20.32■□□□□ 0.84
DDR1-229ENST00000396342 SP3Q02447 781 aa20.32■□□□□ 0.84
DDR1-229ENST00000396342 VGLL4Q14135 290 aa20.32■□□□□ 0.84
DDR1-229ENST00000396342 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
DDR1-229ENST00000396342 ZNF341Q9BYN7 854 aa20.32■□□□□ 0.84
DDR1-229ENST00000396342 EFCC1Q9HA90 598 aa20.32■□□□□ 0.84
DDR1-229ENST00000396342 CACNB3P54284 484 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 CRHR2Q13324 411 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 SNAPC2Q13487 334 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 SPTY2D1Q68D10 685 aaPredicted RBP20.31■□□□□ 0.84
DDR1-229ENST00000396342 ERO1BQ86YB8 467 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 TEPSINQ96N21 525 aa20.31■□□□□ 0.84
DDR1-229ENST00000396342 LRRFIP2Q9Y608 721 aaKnown RBP20.31■□□□□ 0.84
DDR1-229ENST00000396342 SSC5DA1L4H1 1573 aa20.3■□□□□ 0.84
DDR1-229ENST00000396342 GORABQ5T7V8 394 aa20.3■□□□□ 0.84
DDR1-229ENST00000396342 AOX1Q06278 1338 aa20.29■□□□□ 0.84
DDR1-229ENST00000396342 TESPA1A2RU30 521 aaPredicted RBP20.29■□□□□ 0.84
DDR1-229ENST00000396342 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
DDR1-229ENST00000396342 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
DDR1-229ENST00000396342 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
DDR1-229ENST00000396342 OTOP1Q7RTM1 612 aa20.29■□□□□ 0.84
DDR1-229ENST00000396342 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
DDR1-229ENST00000396342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDR1-229ENST00000396342 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
DDR1-229ENST00000396342 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
DDR1-229ENST00000396342 GRIK5Q16478 980 aa20.28■□□□□ 0.84
DDR1-229ENST00000396342 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
DDR1-229ENST00000396342 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
DDR1-229ENST00000396342 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
DDR1-229ENST00000396342 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
DDR1-229ENST00000396342 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
DDR1-229ENST00000396342 RARSP54136 660 aaKnown RBP20.27■□□□□ 0.84
DDR1-229ENST00000396342 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
DDR1-229ENST00000396342 ATG9AQ7Z3C6 839 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms