RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 CEP126Q9P2H0 1117 aa8.19□□□□□ -1.1
LMO3-205ENST00000396205 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
LMO3-205ENST00000396205 ATP2B3Q16720 1220 aa8.18□□□□□ -1.1
LMO3-205ENST00000396205 TBC1D10BQ4KMP7 808 aaPredicted RBP8.18□□□□□ -1.1
LMO3-205ENST00000396205 ANGEL2Q5VTE6 544 aaKnown RBP8.18□□□□□ -1.1
LMO3-205ENST00000396205 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
LMO3-205ENST00000396205 CTCFP49711 727 aaPredicted RBP8.18□□□□□ -1.1
LMO3-205ENST00000396205 HSP90AB4PQ58FF6 505 aa8.18□□□□□ -1.1
LMO3-205ENST00000396205 CAPNS2Q96L46 248 aa8.18□□□□□ -1.1
LMO3-205ENST00000396205 NAV1Q8NEY1 1877 aa8.18□□□□□ -1.1
LMO3-205ENST00000396205 UQCRFS1P1P0C7P4 283 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TM4SF4P48230 202 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 DLGAP5Q15398 846 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 MFSD14BQ5SR56 506 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 RASAL3Q86YV0 1011 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 IDI2Q9BXS1 227 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 NF2P35240 595 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 INHBEP58166 350 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 CFAP100Q494V2 611 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
LMO3-205ENST00000396205 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TEPSINQ96N21 525 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 ZBTB40Q9NUA8 1239 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TRAF5O00463 557 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TNNI2P48788 182 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 SUPT20HL1Q3ZLR7 823 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
LMO3-205ENST00000396205 CEP85Q6P2H3 762 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TEKT1Q969V4 418 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
LMO3-205ENST00000396205 SRGAP3O43295 1099 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 CRKP46108 304 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.16□□□□□ -1.1
LMO3-205ENST00000396205 ZNF112Q9UJU3 913 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 RAB11FIP3O75154 756 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
LMO3-205ENST00000396205 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
LMO3-205ENST00000396205 GYG1P46976 350 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 MYO5AQ9Y4I1 1855 aaKnown RBP8.16□□□□□ -1.1
LMO3-205ENST00000396205 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 ENTPD3O75355 529 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 GINM1Q9NU53 330 aa8.16□□□□□ -1.1
LMO3-205ENST00000396205 ZNF70Q9UC06 446 aaPredicted RBP8.16□□□□□ -1.1
LMO3-205ENST00000396205 TBC1D12O60347 775 aa8.15□□□□□ -1.1
LMO3-205ENST00000396205 HSPA8P11142 646 aaKnown RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 CCDC102BQ68D86 513 aa8.15□□□□□ -1.1
LMO3-205ENST00000396205 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 FTSJ3Q8IY81 847 aaKnown RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 RCAN3Q9UKA8 241 aa8.15□□□□□ -1.1
LMO3-205ENST00000396205 GREB1LQ9C091 1923 aaPredicted RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 RLBP1P12271 317 aa8.15□□□□□ -1.1
LMO3-205ENST00000396205 METTL16Q86W50 562 aaKnown RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
LMO3-205ENST00000396205 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.11
LMO3-205ENST00000396205 A0A1B0GUL7 405 aa8.15□□□□□ -1.11
LMO3-205ENST00000396205 GSTO1P78417 241 aa8.15□□□□□ -1.11
LMO3-205ENST00000396205 DEFB129Q9H1M3 183 aa8.15□□□□□ -1.11
LMO3-205ENST00000396205 ABT1Q9ULW3 272 aaKnown RBP8.15□□□□□ -1.11
LMO3-205ENST00000396205 A0A0G2JMZ2 1700 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 BCAMP50895 628 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 SREBF2Q12772 1141 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 FAM151AQ8WW52 585 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 TTF2Q9UNY4 1162 aaKnown RBP8.14□□□□□ -1.11
LMO3-205ENST00000396205 GPR75-ASB3A0A0A6YYF3 556 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 TNNI3KQ59H18 835 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 VPS37DQ86XT2 251 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 KIAA0825Q8IV33 1275 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 XAGE2Q96GT9 111 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 PRMT6Q96LA8 375 aaPredicted RBP8.14□□□□□ -1.11
LMO3-205ENST00000396205 FPGT-TNNI3KV9GXZ4 949 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 MROH7-TTC4A0A0A0MT08 1334 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
LMO3-205ENST00000396205 MYH1P12882 1939 aa8.14□□□□□ -1.11
LMO3-205ENST00000396205 PPP4CP60510 307 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 MANSC4A6NHS7 340 aaPredicted RBP8.13□□□□□ -1.11
LMO3-205ENST00000396205 HMMRO75330 724 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
LMO3-205ENST00000396205 HUNKP57058 714 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 TFCP2Q12800 502 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 G3BP1Q13283 466 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-205ENST00000396205 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-205ENST00000396205 KLHDC4Q8TBB5 520 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 SLC45A1Q9Y2W3 748 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 ANKRD13AQ8IZ07 590 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 MGAMO43451 1857 aa8.13□□□□□ -1.11
LMO3-205ENST00000396205 ZNF236Q9UL36 1845 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 FOXN1O15353 648 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 LDHBP07195 334 aaKnown RBP8.12□□□□□ -1.11
LMO3-205ENST00000396205 CAPN2P17655 700 aa8.12□□□□□ -1.11
LMO3-205ENST00000396205 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
LMO3-205ENST00000396205 DAGLAQ9Y4D2 1042 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms