RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 SATB1Q01826 763 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 EIF4A2Q14240 407 aaKnown RBP8.21□□□□□ -1.1
RPS29-202ENST00000396020 PAG1Q9NWQ8 432 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 MAP3K5Q99683 1374 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 GAS8O95995 478 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 GEN1Q17RS7 908 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 CABLES1Q8TDN4 633 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.21□□□□□ -1.1
RPS29-202ENST00000396020 RAB3GAP1Q15042 981 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 CEP57Q86XR8 500 aa8.21□□□□□ -1.1
RPS29-202ENST00000396020 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
RPS29-202ENST00000396020 CTAGE15A4D2H0 777 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 OPA1O60313 960 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 CTAGE8P0CG41 777 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 NAA16Q6N069 864 aaPredicted RBP8.2□□□□□ -1.1
RPS29-202ENST00000396020 CTAGE6Q86UF2 777 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 CTAGE4Q8IX94 777 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 SNX16P57768 344 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 PLCB3Q01970 1234 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 HMG20BQ9P0W2 317 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.2□□□□□ -1.16e-28■■□□□ 11.8
RPS29-202ENST00000396020 DYNC1I1O14576 645 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 SMC1BQ8NDV3 1235 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 CCT6BQ92526 530 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 RABEP2Q9H5N1 569 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 HDAC9Q9UKV0 1011 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 PZPP20742 1482 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 SPDYE3A6NKU9 549 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 SKILP12757 684 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 EIF6P56537 245 aaKnown RBP8.2□□□□□ -1.1
RPS29-202ENST00000396020 TAF12Q16514 161 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
RPS29-202ENST00000396020 RTL9Q8NET4 1388 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 NOLC1Q14978 699 aaKnown RBP eCLIP8.2□□□□□ -1.11e-7■■□□□ 13.8
RPS29-202ENST00000396020 ECHDC1Q9NTX5 307 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
RPS29-202ENST00000396020 A0A1W2PP64 1363 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 NCBP1Q09161 790 aaKnown RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 TFCP2Q12800 502 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 ZNF174Q15697 407 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 SYT10Q6XYQ8 523 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 RNF34Q969K3 372 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 STMN4Q9H169 189 aaPredicted RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 E7EVH7 732 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 IL2RBP14784 551 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 IRX5P78411 483 aaPredicted RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 PPP2R5DQ14738 602 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 DDX12PQ92771 950 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 CLSTN2Q9H4D0 955 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 SAMD9LQ8IVG5 1584 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 HGSO14964 777 aaPredicted RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 IFNKQ9P0W0 207 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 AKR1B10O60218 316 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 ERCC3P19447 782 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 MRPL50Q8N5N7 158 aaKnown RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 XAGE3Q8WTP9 111 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 TBC1D7Q9P0N9 293 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 TXNDC16Q9P2K2 825 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 NIP7Q9Y221 180 aaKnown RBP eCLIP8.19□□□□□ -1.1
RPS29-202ENST00000396020 FAM169AQ9Y6X4 670 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 LONRF3Q496Y0 759 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 ZGPATQ8N5A5 531 aaKnown RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 TRIM7Q9C029 511 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 TACC1O75410 805 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 HPDP32754 393 aaPredicted RBP8.19□□□□□ -1.1
RPS29-202ENST00000396020 RUFY3Q7L099 469 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 GTF3C6Q969F1 213 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 PLEKHA4Q9H4M7 779 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
RPS29-202ENST00000396020 FLT4P35916 1363 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 KRT222Q8N1A0 295 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 KCNG4Q8TDN1 519 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 BRF1Q92994 677 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 ARFGAP3Q9NP61 516 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 FRMD4BQ9Y2L6 1034 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 ADGRL2O95490 1459 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 DDB1Q16531 1140 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 SEL1L2Q5TEA6 688 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 ESYT1Q9BSJ8 1104 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 PCDH11XQ9BZA7 1347 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 PCDH11YQ9BZA8 1340 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
RPS29-202ENST00000396020 MEIS3Q99687 375 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 HAUS7Q99871 368 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 PFDN4Q9NQP4 134 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 TTC37Q6PGP7 1564 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 CIB2O75838 187 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
RPS29-202ENST00000396020 UQCRFS1P1P0C7P4 283 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 PRIM1P49642 420 aaKnown RBP8.18□□□□□ -1.1
RPS29-202ENST00000396020 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
RPS29-202ENST00000396020 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
RPS29-202ENST00000396020 CCDC186Q7Z3E2 898 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms