RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HSPD1P10809 573 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 GTF2IP78347 998 aa24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 KIAA2012Q0VF49 1180 aa24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 NECTIN1Q15223 517 aa24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 PODNQ7Z5L7 613 aa24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 DZIP1Q86YF9 867 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 FBXW7Q969H0 707 aa24.45■■□□□ 1.5
VCPKMT-202ENST00000395860 PPIP5K2O43314 1243 aa24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 MFSD14BQ5SR56 506 aa24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 TMED8Q6PL24 325 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 U3KPZ7 1027 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 NLGN2Q8NFZ4 835 aa24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 BCS1LQ9Y276 419 aa24.44■■□□□ 1.5
VCPKMT-202ENST00000395860 ARFGEF1Q9Y6D6 1849 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 MYH2Q9UKX2 1941 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 ECE2O60344 883 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 MBD4O95243 580 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 RNF20Q5VTR2 975 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 TTLL5Q6EMB2 1281 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 ADGRA1Q86SQ6 560 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 ZNF384Q8TF68 577 aa24.43■■□□□ 1.5
VCPKMT-202ENST00000395860 RABEP1Q15276 862 aa24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 CREB3L3Q68CJ9 461 aa24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 MIGA1Q8NAN2 632 aa24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 IPO9Q96P70 1041 aaKnown RBP24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 STRBPQ96SI9 672 aaKnown RBP24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 ARMT1Q9H993 441 aa24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 SNX14Q9Y5W7 946 aa24.42■■□□□ 1.5
VCPKMT-202ENST00000395860 SCN9AQ15858 1988 aa24.41■■□□□ 1.5
VCPKMT-202ENST00000395860 MAGEB6P1A0A0J9YX57 407 aa24.41■■□□□ 1.5
VCPKMT-202ENST00000395860 ZKSCAN1P17029 563 aaPredicted RBP24.41■■□□□ 1.5
VCPKMT-202ENST00000395860 GSTO1P78417 241 aa24.41■■□□□ 1.5
VCPKMT-202ENST00000395860 SLC27A2O14975 620 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 GRIK5Q16478 980 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 RASEFQ8IZ41 740 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 LCORLQ8N3X6 602 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 KCNB2Q92953 911 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 IL17RAQ96F46 866 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 VPS33BQ9H267 617 aa24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 ZNF646O15015 1829 aaPredicted RBP24.4■■□□□ 1.5
VCPKMT-202ENST00000395860 ZNF277Q9NRM2 450 aaPredicted RBP24.39■■□□□ 1.5
VCPKMT-202ENST00000395860 PSME4Q14997 1843 aa24.39■■□□□ 1.49
VCPKMT-202ENST00000395860 FOXP2O15409 715 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 APPP05067 770 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 GNAT2P19087 354 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 FHDC1Q9C0D6 1143 aaPredicted RBP24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 CTNNA3Q9UI47 895 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 SUGT1Q9Y2Z0 365 aa24.38■■□□□ 1.49
VCPKMT-202ENST00000395860 LDHCP07864 332 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 RIOK1Q9BRS2 568 aaKnown RBP24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 TAOK3Q9H2K8 898 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 KCNQ5Q9NR82 932 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 PATL2C9JE40 543 aaKnown RBP24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 BECN1Q14457 450 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 STRIP1Q5VSL9 837 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
VCPKMT-202ENST00000395860 FGAP02671 866 aa24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 IARSP41252 1262 aaKnown RBP24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 DYNLL1P63167 89 aaKnown RBP24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 DIXDC1Q155Q3 683 aa24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 SLF2Q8IX21 1173 aa24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 AATFQ9NY61 560 aaKnown RBP eCLIP24.36■■□□□ 1.49
VCPKMT-202ENST00000395860 USP17L3A6NCW0 530 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 USP17L4A6NCW7 530 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 CYP21A2P08686 494 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 USP17L1Q7RTZ2 530 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 CERS5Q8N5B7 392 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 MXD3Q9BW11 206 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 LAMA4Q16363 1823 aa24.35■■□□□ 1.49
VCPKMT-202ENST00000395860 MROH7-TTC4A0A0A0MT08 1334 aa24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 NOL10Q9BSC4 688 aaKnown RBP24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 DAXXQ9UER7 740 aaPredicted RBP24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 COL4A5P29400 1685 aa24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 PRKAB2O43741 272 aa24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 FKBP1AP62942 108 aaKnown RBP24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 IMMTQ16891 758 aaKnown RBP24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 TSGA10IPQ3SY00 556 aa24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 NACAP1Q9BZK3 213 aa24.34■■□□□ 1.49
VCPKMT-202ENST00000395860 RPAP1Q9BWH6 1393 aaPredicted RBP24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 YDJCA8MPS7 323 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 GSG1L2A8MUP6 293 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 F8W031 263 aaPredicted RBP24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 ST18O60284 1047 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 NEK4P51957 841 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 ADCK5Q3MIX3 580 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 HSCBQ8IWL3 235 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 IFNL3Q8IZI9 196 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 SNX21Q969T3 373 aa24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 JAKMIP1Q96N16 626 aaKnown RBP24.33■■□□□ 1.49
VCPKMT-202ENST00000395860 NFKBIEO00221 500 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 BAG3O95817 575 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 KRT32Q14532 448 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 ALX1Q15699 326 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 DACT2Q5SW24 774 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 NAPBQ9H115 298 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 TTF2Q9UNY4 1162 aaKnown RBP24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 ZMYM6O95789 1325 aa24.32■■□□□ 1.48
VCPKMT-202ENST00000395860 CASTP20810 708 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms