RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 ERCC6LQ2NKX8 1250 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 GRIN3BO60391 1043 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 ZNF827Q17R98 1081 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 FILIP1Q7Z7B0 1213 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 TSPYL6Q8N831 410 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 CCDC34Q96HJ3 373 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 LMCD1Q9NZU5 365 aa10.27□□□□□ -0.76
MSH5-205ENST00000395853 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.76
MSH5-205ENST00000395853 PYGLP06737 847 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
MSH5-205ENST00000395853 SNX1Q13596 522 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 PKP1Q13835 747 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 RASA3Q14644 834 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 MRFAP1L1Q96HT8 127 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 ODF2LQ9ULJ1 636 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 ELL2O00472 640 aaPredicted RBP10.27□□□□□ -0.77
MSH5-205ENST00000395853 NAT1P18440 290 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
MSH5-205ENST00000395853 PDIA5Q14554 519 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 MCM6Q14566 821 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 RBM12BQ8IXT5 1001 aaKnown RBP10.27□□□□□ -0.77
MSH5-205ENST00000395853 ACSBG1Q96GR2 724 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 KIF9Q9HAQ2 790 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 SUN2Q9UH99 717 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 ELP1O95163 1332 aa10.27□□□□□ -0.77
MSH5-205ENST00000395853 ARHGAP29Q52LW3 1261 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 MAP3K19Q56UN5 1328 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 DZIP3Q86Y13 1208 aaKnown RBP10.26□□□□□ -0.77
MSH5-205ENST00000395853 SLX1AQ9BQ83 275 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 FAM208AQ9UK61 1670 aaKnown RBP10.26□□□□□ -0.77
MSH5-205ENST00000395853 AK9Q5TCS8 1911 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 SHANK3Q9BYB0 1731 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 VAMP4O75379 141 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 DDR1Q08345 913 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 PTPN14Q15678 1187 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 PLEKHG4BQ96PX9 1271 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
MSH5-205ENST00000395853 IRX2Q9BZI1 471 aaPredicted RBP10.26□□□□□ -0.77
MSH5-205ENST00000395853 RWDD1Q9H446 243 aaPredicted RBP10.26□□□□□ -0.77
MSH5-205ENST00000395853 LRRC4BQ9NT99 713 aa10.26□□□□□ -0.77
MSH5-205ENST00000395853 GNAI1P63096 354 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 TMEM57Q8N5G2 664 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 C3orf20Q8ND61 904 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 RAB27AP51159 221 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 PREPLQ4J6C6 727 aaPredicted RBP10.25□□□□□ -0.77
MSH5-205ENST00000395853 CCDC178Q5BJE1 867 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 ARPC5LQ9BPX5 153 aa10.25□□□□□ -0.77
MSH5-205ENST00000395853 IQCGQ9H095 443 aaKnown RBP10.25□□□□□ -0.77
MSH5-205ENST00000395853 PNPLA7Q6ZV29 1317 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 ALDH1L2Q3SY69 923 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 FBXW10Q5XX13 1052 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 ZBTB10Q96DT7 871 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 LTN1O94822 1766 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 CHUKO15111 745 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 ALDH1B1P30837 517 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 LRMPQ12912 555 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
MSH5-205ENST00000395853 C8orf58Q8NAV2 365 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 PICK1Q9NRD5 415 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 G3BP2Q9UN86 482 aaKnown RBP10.24□□□□□ -0.77
MSH5-205ENST00000395853 LY75O60449 1722 aa10.24□□□□□ -0.77
MSH5-205ENST00000395853 ZSCAN9O15535 394 aaPredicted RBP10.23□□□□□ -0.77
MSH5-205ENST00000395853 CDC37Q16543 378 aaPredicted RBP10.23□□□□□ -0.77
MSH5-205ENST00000395853 ZNF280DQ6N043 979 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 YIPF2Q9BWQ6 316 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 TBC1D8O95759 1140 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 LIG3P49916 1009 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 MCM10Q7L590 875 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
MSH5-205ENST00000395853 CABS1Q96KC9 395 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
MSH5-205ENST00000395853 TUBGCP6Q96RT7 1819 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 SASH3O75995 380 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 AMPHP49418 695 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 CLNS1AP54105 237 aaKnown RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 CCDC15Q0P6D6 951 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 IQCA1Q86XH1 822 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 ZKSCAN4Q969J2 545 aaPredicted RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 DDX19BQ9UMR2 479 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 AP5Z1O43299 807 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 PYGBP11216 843 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 TPP2P29144 1249 aaPredicted RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
MSH5-205ENST00000395853 ZSCAN25Q6NSZ9 544 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
MSH5-205ENST00000395853 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms