RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 MYD88Q99836 296 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 DDX19AQ9NUU7 478 aaKnown RBP13□□□□□ -0.33
RAPGEF3-202ENST00000395358 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 KIF4BQ2VIQ3 1234 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 FBXO41Q8TF61 875 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 A0A087WZG4 1122 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 CAND2O75155 1236 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 TUBB4AP04350 444 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 SH3GL3Q99963 347 aa12.99□□□□□ -0.33
RAPGEF3-202ENST00000395358 TTC36A6NLP5 189 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 ATP2C2O75185 946 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 PIP4K2AP48426 406 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 FOSBP53539 338 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC181Q5TID7 509 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 FHOD1Q9Y613 1164 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 ANAPC15P60006 121 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 ORC3Q9UBD5 711 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 GPR161Q8N6U8 529 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC114Q96M63 670 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 USP27XA6NNY8 438 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CORO7P57737 925 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
RAPGEF3-202ENST00000395358 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 LONRF2Q1L5Z9 754 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 TEX11Q8IYF3 940 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 ROBO1Q9Y6N7 1651 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 PDCP20941 246 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 PIGBQ92521 554 aa12.97□□□□□ -0.33
RAPGEF3-202ENST00000395358 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 ZDHHC9Q9Y397 364 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 SLIT3O75094 1523 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 IRF6O14896 467 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 F13A1P00488 732 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAPGEF3-202ENST00000395358 A1BGP04217 495 aa12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 ARID5BQ14865 1188 aa12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 E2F5Q15329 346 aa12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 MAP9Q49MG5 647 aa12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 EPC1Q9H2F5 836 aa12.96□□□□□ -0.34
RAPGEF3-202ENST00000395358 NDUFAB1O14561 156 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 PAX7P23759 505 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 RFC4P35249 363 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 CAVIN2O95810 425 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 FNBP4Q8N3X1 1017 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 CHUKO15111 745 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 ETF1P62495 437 aaKnown RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 FAM76AQ8TAV0 307 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 KIF2CQ99661 725 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 IQSEC2Q5JU85 1478 aa12.95□□□□□ -0.34
RAPGEF3-202ENST00000395358 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
RAPGEF3-202ENST00000395358 ATP5J2-PTCD1G3V325 749 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms