RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SLC9C1Q4G0N8 1177 aa20.14■□□□□ 0.81
SNCA-205ENST00000394991 TMEM39BQ9GZU3 492 aa20.14■□□□□ 0.81
SNCA-205ENST00000394991 ZFYVE28Q9HCC9 887 aa20.14■□□□□ 0.81
SNCA-205ENST00000394991 SERPINA10Q9UK55 444 aa20.14■□□□□ 0.81
SNCA-205ENST00000394991 COLQQ9Y215 455 aaPredicted RBP20.14■□□□□ 0.81
SNCA-205ENST00000394991 IL16Q14005 1332 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 TCP10L2B9ZVM9 353 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 GYG1P46976 350 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 BEND3Q5T5X7 828 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 LDHAL6AQ6ZMR3 332 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
SNCA-205ENST00000394991 OTUD5Q96G74 571 aa20.13■□□□□ 0.81
SNCA-205ENST00000394991 GTF2A2P52657 109 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 MAP3K9P80192 1104 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 GRIK5Q16478 980 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 CCDC184Q52MB2 194 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 ARHGAP39Q9C0H5 1083 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
SNCA-205ENST00000394991 VAMP4O75379 141 aa20.11■□□□□ 0.81
SNCA-205ENST00000394991 MYCP01106 439 aaPredicted RBP20.11■□□□□ 0.81
SNCA-205ENST00000394991 CRKP46108 304 aa20.11■□□□□ 0.81
SNCA-205ENST00000394991 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
SNCA-205ENST00000394991 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
SNCA-205ENST00000394991 HIBADHP31937 336 aaKnown RBP20.1■□□□□ 0.81
SNCA-205ENST00000394991 CCDC57Q2TAC2 916 aa20.1■□□□□ 0.81
SNCA-205ENST00000394991 NBPF11Q86T75 865 aa20.1■□□□□ 0.81
SNCA-205ENST00000394991 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
SNCA-205ENST00000394991 FAM84BQ96KN1 310 aaPredicted RBP20.1■□□□□ 0.81
SNCA-205ENST00000394991 CSADQ9Y600 493 aa20.1■□□□□ 0.81
SNCA-205ENST00000394991 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
SNCA-205ENST00000394991 SPDYE5A6NIY4 337 aa20.09■□□□□ 0.81
SNCA-205ENST00000394991 UBE4AQ14139 1066 aa20.09■□□□□ 0.81
SNCA-205ENST00000394991 ARHGEF6Q15052 776 aa20.09■□□□□ 0.81
SNCA-205ENST00000394991 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
SNCA-205ENST00000394991 MYH13Q9UKX3 1938 aa20.08■□□□□ 0.81
SNCA-205ENST00000394991 H0YGN5 161 aa20.08■□□□□ 0.81
SNCA-205ENST00000394991 GRM8O00222 908 aa20.08■□□□□ 0.81
SNCA-205ENST00000394991 TNNI2P48788 182 aa20.08■□□□□ 0.81
SNCA-205ENST00000394991 BTBD19C9JJ37 291 aa20.07■□□□□ 0.8
SNCA-205ENST00000394991 TLR2O60603 784 aa20.07■□□□□ 0.8
SNCA-205ENST00000394991 CACNB3P54284 484 aa20.07■□□□□ 0.8
SNCA-205ENST00000394991 LACTBP83111 547 aaPredicted RBP20.07■□□□□ 0.8
SNCA-205ENST00000394991 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
SNCA-205ENST00000394991 IQSEC3Q9UPP2 1182 aaPredicted RBP20.06■□□□□ 0.8
SNCA-205ENST00000394991 SZT2Q5T011 3432 aa20.06■□□□□ 0.8
SNCA-205ENST00000394991 MGAMO43451 1857 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 CETPP11597 493 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 ERO1BQ86YB8 467 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 SHISA4Q96DD7 197 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 KAZALD1Q96I82 304 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 WRNIP1Q96S55 665 aa20.05■□□□□ 0.8
SNCA-205ENST00000394991 ZCCHC17Q9NP64 241 aaKnown RBP20.05■□□□□ 0.8
SNCA-205ENST00000394991 AK9Q5TCS8 1911 aa20.04■□□□□ 0.8
SNCA-205ENST00000394991 IRF6O14896 467 aa20.04■□□□□ 0.8
SNCA-205ENST00000394991 CTGFP29279 349 aa20.04■□□□□ 0.8
SNCA-205ENST00000394991 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
SNCA-205ENST00000394991 FBXO33Q7Z6M2 555 aa20.04■□□□□ 0.8
SNCA-205ENST00000394991 ZKSCAN4Q969J2 545 aaPredicted RBP20.04■□□□□ 0.8
SNCA-205ENST00000394991 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
SNCA-205ENST00000394991 ECM2O94769 699 aaPredicted RBP20.03■□□□□ 0.8
SNCA-205ENST00000394991 HDLBPQ00341 1268 aaKnown RBP20.03■□□□□ 0.8
SNCA-205ENST00000394991 KIF22Q14807 665 aa20.03■□□□□ 0.8
SNCA-205ENST00000394991 MTFR1Q15390 333 aa20.03■□□□□ 0.8
SNCA-205ENST00000394991 RIPOR2Q9Y4F9 1068 aa20.03■□□□□ 0.8
SNCA-205ENST00000394991 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
SNCA-205ENST00000394991 PPIL2Q13356 520 aa20.02■□□□□ 0.8
SNCA-205ENST00000394991 SNAPC2Q13487 334 aa20.02■□□□□ 0.8
SNCA-205ENST00000394991 NCBP3Q53F19 620 aaKnown RBP20.02■□□□□ 0.8
SNCA-205ENST00000394991 TEKT1Q969V4 418 aa20.02■□□□□ 0.8
SNCA-205ENST00000394991 C9orf78Q9NZ63 289 aaPredicted RBP20.02■□□□□ 0.8
SNCA-205ENST00000394991 RPAP1Q9BWH6 1393 aaPredicted RBP20.01■□□□□ 0.79
SNCA-205ENST00000394991 PRMT2P55345 433 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 C17orf99Q6UX52 265 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 CHRDL2Q6WN34 429 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 FAM83AQ86UY5 434 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 RANBP2P49792 3224 aaKnown RBP20.01■□□□□ 0.79
SNCA-205ENST00000394991 MROH5Q6ZUA9 1318 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 ADGRA2Q96PE1 1338 aa20.01■□□□□ 0.79
SNCA-205ENST00000394991 ALDH1L1O75891 902 aa20■□□□□ 0.79
SNCA-205ENST00000394991 GNRH1P01148 92 aa20■□□□□ 0.79
SNCA-205ENST00000394991 APOBEC3HQ6NTF7 200 aaKnown RBP20■□□□□ 0.79
SNCA-205ENST00000394991 TBC1D22AQ8WUA7 517 aa20■□□□□ 0.79
SNCA-205ENST00000394991 TRIM47Q96LD4 638 aa20■□□□□ 0.79
SNCA-205ENST00000394991 ZDHHC15Q96MV8 337 aa20■□□□□ 0.79
SNCA-205ENST00000394991 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
SNCA-205ENST00000394991 CPA4Q9UI42 421 aa20■□□□□ 0.79
SNCA-205ENST00000394991 INPP5BP32019 993 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 LRRC24Q50LG9 513 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 FKBP1CQ5VVH2 108 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 VPS37DQ86XT2 251 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 VGLL2Q8N8G2 317 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 TMOD2Q9NZR1 351 aa19.99■□□□□ 0.79
SNCA-205ENST00000394991 SALL2Q9Y467 1007 aaPredicted RBP19.99■□□□□ 0.79
SNCA-205ENST00000394991 NBPF7P0C2Y1 421 aaPredicted RBP19.98■□□□□ 0.79
SNCA-205ENST00000394991 OSBPP22059 807 aa19.98■□□□□ 0.79
SNCA-205ENST00000394991 SLC4A10Q6U841 1118 aa19.98■□□□□ 0.79
SNCA-205ENST00000394991 WDR63Q8IWG1 891 aa19.98■□□□□ 0.79
SNCA-205ENST00000394991 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.98■□□□□ 0.79
SNCA-205ENST00000394991 SRCIN1Q9C0H9 1055 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms